RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 ACVR2BQ13705 512 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 COL9A3Q14050 684 aaPredicted RBP8.84□□□□□ -0.99
GINS3-207ENST00000567400 CCDC144BQ3MJ40 725 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 TRIM60Q495X7 471 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 TMEM63BQ5T3F8 832 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 C1orf53Q5VUE5 145 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 SLC30A10Q6XR72 485 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 SLC39A5Q6ZMH5 540 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 CYB5R4Q7L1T6 521 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 KLHDC9Q8NEP7 349 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 FERMT2Q96AC1 680 aa8.84□□□□□ -0.99
GINS3-207ENST00000567400 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
GINS3-207ENST00000567400 ZHX1Q9UKY1 873 aaPredicted RBP8.84□□□□□ -0.99
GINS3-207ENST00000567400 CDH23Q9H251 3354 aa8.83□□□□□ -1
GINS3-207ENST00000567400 A0A1W2PPC1 479 aa8.83□□□□□ -1
GINS3-207ENST00000567400 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
GINS3-207ENST00000567400 A0A1W2PQY0 241 aa8.83□□□□□ -1
GINS3-207ENST00000567400 DUSP11O75319 330 aaKnown RBP8.83□□□□□ -1
GINS3-207ENST00000567400 ITGB8P26012 769 aa8.83□□□□□ -1
GINS3-207ENST00000567400 CST5P28325 142 aaPredicted RBP8.83□□□□□ -1
GINS3-207ENST00000567400 NT5C2P49902 561 aa8.83□□□□□ -1
GINS3-207ENST00000567400 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
GINS3-207ENST00000567400 SEC23AQ15436 765 aa8.83□□□□□ -1
GINS3-207ENST00000567400 SLC35G1Q2M3R5 365 aa8.83□□□□□ -1
GINS3-207ENST00000567400 NSMFQ6X4W1 530 aa8.83□□□□□ -1
GINS3-207ENST00000567400 STOX1Q6ZVD7 989 aa8.83□□□□□ -1
GINS3-207ENST00000567400 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
GINS3-207ENST00000567400 IQCA1Q86XH1 822 aa8.83□□□□□ -1
GINS3-207ENST00000567400 MORC4Q8TE76 937 aa8.83□□□□□ -1
GINS3-207ENST00000567400 LRCH3Q96II8 777 aa8.83□□□□□ -1
GINS3-207ENST00000567400 UBA5Q9GZZ9 404 aa8.83□□□□□ -1
GINS3-207ENST00000567400 UPF3AQ9H1J1 476 aaKnown RBP8.83□□□□□ -1
GINS3-207ENST00000567400 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
GINS3-207ENST00000567400 SENP2Q9HC62 589 aa8.83□□□□□ -1
GINS3-207ENST00000567400 CTNNA3Q9UI47 895 aa8.83□□□□□ -1
GINS3-207ENST00000567400 FAM184BQ9ULE4 1060 aa8.83□□□□□ -1
GINS3-207ENST00000567400 ATP11BQ9Y2G3 1177 aa8.83□□□□□ -1
GINS3-207ENST00000567400 WDR19Q8NEZ3 1342 aa8.82□□□□□ -1
GINS3-207ENST00000567400 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
GINS3-207ENST00000567400 ACLYP53396 1101 aa8.82□□□□□ -1
GINS3-207ENST00000567400 ANTXR2P58335 489 aa8.82□□□□□ -1
GINS3-207ENST00000567400 NKX3-2P78367 333 aa8.82□□□□□ -1
GINS3-207ENST00000567400 BAATQ14032 418 aaPredicted RBP8.82□□□□□ -1
GINS3-207ENST00000567400 KCNA10Q16322 511 aa8.82□□□□□ -1
GINS3-207ENST00000567400 GPATCH4Q5T3I0 446 aaKnown RBP8.82□□□□□ -1
GINS3-207ENST00000567400 TAPT1Q6NXT6 567 aa8.82□□□□□ -1
GINS3-207ENST00000567400 RNF180Q86T96 592 aa8.82□□□□□ -1
GINS3-207ENST00000567400 FBXO16Q8IX29 292 aaPredicted RBP8.82□□□□□ -1
GINS3-207ENST00000567400 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
GINS3-207ENST00000567400 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
GINS3-207ENST00000567400 KRT23Q9C075 422 aa8.82□□□□□ -1
GINS3-207ENST00000567400 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
GINS3-207ENST00000567400 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
GINS3-207ENST00000567400 PDGFCQ9NRA1 345 aa8.82□□□□□ -1
GINS3-207ENST00000567400 GNEQ9Y223 722 aaKnown RBP8.82□□□□□ -1
GINS3-207ENST00000567400 EYSQ5T1H1 3165 aa8.81□□□□□ -1
GINS3-207ENST00000567400 ASB14A6NK59 587 aa8.81□□□□□ -1
GINS3-207ENST00000567400 OPLAHO14841 1288 aa8.81□□□□□ -1
GINS3-207ENST00000567400 SMPD1P17405 629 aa8.81□□□□□ -1
GINS3-207ENST00000567400 ALDH5A1P51649 535 aaPredicted RBP8.81□□□□□ -1
GINS3-207ENST00000567400 GJA9P57773 515 aa8.81□□□□□ -1
GINS3-207ENST00000567400 RPS6P62753 249 aaKnown RBP8.81□□□□□ -1
GINS3-207ENST00000567400 TLE2Q04725 743 aa8.81□□□□□ -1
GINS3-207ENST00000567400 CDC37Q16543 378 aaPredicted RBP8.81□□□□□ -1
GINS3-207ENST00000567400 USH1GQ495M9 461 aa8.81□□□□□ -1
GINS3-207ENST00000567400 ASPRV1Q53RT3 343 aa8.81□□□□□ -1
GINS3-207ENST00000567400 EEPD1Q7L9B9 569 aa8.81□□□□□ -1
GINS3-207ENST00000567400 ADGRF4Q8IZF3 695 aa8.81□□□□□ -1
GINS3-207ENST00000567400 TDHQ8IZJ6 230 aa8.81□□□□□ -1
GINS3-207ENST00000567400 RUFY2Q8WXA3 655 aa8.81□□□□□ -1
GINS3-207ENST00000567400 MAP4K1Q92918 833 aa8.81□□□□□ -1
GINS3-207ENST00000567400 UBAC1Q9BSL1 405 aa8.81□□□□□ -1
GINS3-207ENST00000567400 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
GINS3-207ENST00000567400 LSG1Q9H089 658 aaKnown RBP8.81□□□□□ -1
GINS3-207ENST00000567400 KAT14Q9H8E8 782 aa8.81□□□□□ -1
GINS3-207ENST00000567400 PTPDC1A2A3K4 754 aa8.8□□□□□ -1
GINS3-207ENST00000567400 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
GINS3-207ENST00000567400 E7EWF7 191 aa8.8□□□□□ -1
GINS3-207ENST00000567400 PPP1R11O60927 126 aaPredicted RBP8.8□□□□□ -1
GINS3-207ENST00000567400 ASGR1P07306 291 aa8.8□□□□□ -1
GINS3-207ENST00000567400 C6orf222P0C671 652 aaPredicted RBP8.8□□□□□ -1
GINS3-207ENST00000567400 EDNRBP24530 442 aa8.8□□□□□ -1
GINS3-207ENST00000567400 BEX3Q00994 111 aa8.8□□□□□ -1
GINS3-207ENST00000567400 TNFAIP2Q03169 654 aa8.8□□□□□ -1
GINS3-207ENST00000567400 QRICH1Q2TAL8 776 aa8.8□□□□□ -1
GINS3-207ENST00000567400 CCDC178Q5BJE1 867 aa8.8□□□□□ -1
GINS3-207ENST00000567400 IFIT1BQ5T764 474 aaKnown RBP8.8□□□□□ -1
GINS3-207ENST00000567400 CHST3Q7LGC8 479 aa8.8□□□□□ -1
GINS3-207ENST00000567400 ANKRD33Q7Z3H0 272 aa8.8□□□□□ -1
GINS3-207ENST00000567400 TLK2Q86UE8 772 aa8.8□□□□□ -1
GINS3-207ENST00000567400 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
GINS3-207ENST00000567400 TBC1D5Q92609 795 aa8.8□□□□□ -1
GINS3-207ENST00000567400 MTMR8Q96EF0 704 aa8.8□□□□□ -1
GINS3-207ENST00000567400 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
GINS3-207ENST00000567400 JMJD4Q9H9V9 463 aa8.8□□□□□ -1
GINS3-207ENST00000567400 PRDM5Q9NQX1 630 aaPredicted RBP8.8□□□□□ -1
GINS3-207ENST00000567400 COL20A1Q9P218 1284 aa8.8□□□□□ -1
GINS3-207ENST00000567400 MAD2L2Q9UI95 211 aa8.8□□□□□ -1
GINS3-207ENST00000567400 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms