RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 CCDC66A2RUB6 948 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 FAM196BA6NMK8 535 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 CXCL9Q07325 125 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 DLGAP5Q15398 846 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 FKBP1CQ5VVH2 108 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 GMCL1P1Q8NEA9 526 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 AK8Q96MA6 479 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 CCSER1Q9C0I3 900 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 HSD3B7Q9H2F3 369 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 TMEM60Q9H2L4 133 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 RIC8AQ9NPQ8 531 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 SLURP2P0DP57 97 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 YBX3P16989 372 aaKnown RBP eCLIP26.29■■□□□ 1.8
LINC00543-201ENST00000567234 ICA1Q05084 483 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 SEPT2Q15019 361 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 TTBK2Q6IQ55 1244 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 PDXDC2PQ6P474 469 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 ARHGAP27Q6ZUM4 889 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 JDP2Q8WYK2 163 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 TSC1Q92574 1164 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 COA7Q96BR5 231 aa26.29■■□□□ 1.8
LINC00543-201ENST00000567234 ERCC5P28715 1186 aaPredicted RBP26.28■■□□□ 1.8
LINC00543-201ENST00000567234 SLFN13Q68D06 897 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 SIAH1Q8IUQ4 282 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 FAM151AQ8WW52 585 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 CSRNP1Q96S65 589 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 GLT8D2Q9H1C3 349 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 IMPACTQ9P2X3 320 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 NRBP1Q9UHY1 535 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 OR52Z1P0C646 297 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 SLC1A4P43007 532 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 AFMP43652 599 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 RBM26Q5T8P6 1007 aaKnown RBP26.28■■□□□ 1.8
LINC00543-201ENST00000567234 KCTD1Q719H9 257 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 ENOX1Q8TC92 643 aaKnown RBP26.28■■□□□ 1.8
LINC00543-201ENST00000567234 TBCKQ8TEA7 893 aa26.28■■□□□ 1.8
LINC00543-201ENST00000567234 BIN2Q9UBW5 565 aaPredicted RBP26.28■■□□□ 1.8
LINC00543-201ENST00000567234 ZNF70Q9UC06 446 aaPredicted RBP26.28■■□□□ 1.8
LINC00543-201ENST00000567234 SBF1O95248 1867 aa26.27■■□□□ 1.8
LINC00543-201ENST00000567234 DHX8Q14562 1220 aaKnown RBP26.27■■□□□ 1.8
LINC00543-201ENST00000567234 LETM2Q2VYF4 491 aa26.27■■□□□ 1.8
LINC00543-201ENST00000567234 GMCL1Q96IK5 515 aa26.27■■□□□ 1.8
LINC00543-201ENST00000567234 GTPBP6O43824 516 aaPredicted RBP26.26■■□□□ 1.79
LINC00543-201ENST00000567234 CCNT1O60563 726 aaKnown RBP26.26■■□□□ 1.79
LINC00543-201ENST00000567234 MRPL12P52815 198 aaKnown RBP26.26■■□□□ 1.79
LINC00543-201ENST00000567234 SPDYE2Q495Y8 402 aa26.26■■□□□ 1.79
LINC00543-201ENST00000567234 USP17L10C9JJH3 530 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 CBFA2T2O43439 604 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 PPP1R11O60927 126 aaPredicted RBP26.25■■□□□ 1.79
LINC00543-201ENST00000567234 LMOD1P29536 600 aaPredicted RBP26.25■■□□□ 1.79
LINC00543-201ENST00000567234 MMP14P50281 582 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 FANCCQ00597 558 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 JAKMIP3Q5VZ66 844 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 XPO4Q9C0E2 1151 aaKnown RBP26.25■■□□□ 1.79
LINC00543-201ENST00000567234 DISC1Q9NRI5 854 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 IFNKQ9P0W0 207 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 SLC16A2P36021 539 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 UBA7P41226 1012 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 CLK2P49760 499 aaKnown RBP26.25■■□□□ 1.79
LINC00543-201ENST00000567234 C17orf53Q8N3J3 647 aaPredicted RBP26.25■■□□□ 1.79
LINC00543-201ENST00000567234 CUL5Q93034 780 aa26.25■■□□□ 1.79
LINC00543-201ENST00000567234 MYL1P05976 194 aa26.24■■□□□ 1.79
LINC00543-201ENST00000567234 GSDMDP57764 484 aa26.24■■□□□ 1.79
LINC00543-201ENST00000567234 SEMA3FQ13275 785 aa26.24■■□□□ 1.79
LINC00543-201ENST00000567234 CCDC144BQ3MJ40 725 aa26.24■■□□□ 1.79
LINC00543-201ENST00000567234 CUEDC2Q9H467 287 aa26.24■■□□□ 1.79
LINC00543-201ENST00000567234 DICER1Q9UPY3 1922 aaKnown RBP26.24■■□□□ 1.79
LINC00543-201ENST00000567234 F5H6K3 240 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 GDF11O95390 407 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 STAT6P42226 847 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 KLRC3Q07444 240 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 SHROOM1Q2M3G4 852 aaPredicted RBP26.23■■□□□ 1.79
LINC00543-201ENST00000567234 CIAPIN1Q6FI81 312 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 CCDC112Q8NEF3 446 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.23■■□□□ 1.79
LINC00543-201ENST00000567234 MAGEF1Q9HAY2 307 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 TCP10L2B9ZVM9 353 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 GH2P01242 217 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 FAM83AQ86UY5 434 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 KCND1Q9NSA2 647 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 TMEM260Q9NX78 707 aa26.23■■□□□ 1.79
LINC00543-201ENST00000567234 SOCS7O14512 581 aa26.22■■□□□ 1.79
LINC00543-201ENST00000567234 RRAGBQ5VZM2 374 aa26.22■■□□□ 1.79
LINC00543-201ENST00000567234 ZNF771Q7L3S4 317 aaPredicted RBP26.22■■□□□ 1.79
LINC00543-201ENST00000567234 FANCLQ9NW38 375 aa26.22■■□□□ 1.79
LINC00543-201ENST00000567234 RMND1Q9NWS8 449 aa26.22■■□□□ 1.79
LINC00543-201ENST00000567234 CNTNAP1P78357 1384 aa26.22■■□□□ 1.79
LINC00543-201ENST00000567234 SHTN1A0MZ66 631 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 KIF2AO00139 706 aaPredicted RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 TBC1D12O60347 775 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 SLC20A2Q08357 652 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 KARSQ15046 597 aaKnown RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 LRRC8AQ8IWT6 810 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 MTRQ99707 1265 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 FAM53CQ9NYF3 392 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 MYH7BA7E2Y1 1941 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 CLRN2A0PK11 232 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 SPDYE4A6NLX3 237 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 QRICH1Q2TAL8 776 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms