RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ZNF536O15090 1300 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 GRIN2DO15399 1336 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 PLIN4Q96Q06 1357 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 BDP1A6H8Y1 2624 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 TSPY3P0CV98 308 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 TSPY8P0CW00 308 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 IGFBP4P22692 258 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 OAZ1P54368 228 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
PALB2-205ENST00000567003 EEPD1Q7L9B9 569 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 TLK2Q86UE8 772 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 IFNL3Q8IZI9 196 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 HERVK_113Q902F9 699 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 PURBQ96QR8 312 aaKnown RBP18.44■□□□□ 0.54
PALB2-205ENST00000567003 TRPV6Q9H1D0 765 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 HIPK3Q9H422 1215 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 PDGFCQ9NRA1 345 aa18.44■□□□□ 0.54
PALB2-205ENST00000567003 GNEQ9Y223 722 aaKnown RBP18.44■□□□□ 0.54
PALB2-205ENST00000567003 ALAS1P13196 640 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 SMPD1P17405 629 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 RABGGTBP53611 331 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 PSMC6P62333 389 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 FSCN1Q16658 493 aaKnown RBP18.43■□□□□ 0.54
PALB2-205ENST00000567003 MUM1L1Q5H9M0 696 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 OTOP2Q7RTS6 562 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 FBXO16Q8IX29 292 aaPredicted RBP18.43■□□□□ 0.54
PALB2-205ENST00000567003 SLC43A3Q8NBI5 491 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 NEDD1Q8NHV4 660 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 TRERF1Q96PN7 1200 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 THEGQ9P2T0 379 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 MSRAQ9UJ68 235 aa18.43■□□□□ 0.54
PALB2-205ENST00000567003 DYNC1LI2O43237 492 aaPredicted RBP18.42■□□□□ 0.54
PALB2-205ENST00000567003 MYOGP15173 224 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 COL9A1P20849 921 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 MCCP23508 829 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 STAT2P52630 851 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 NKX3-2P78367 333 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 TFAP4Q01664 338 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 RAB30Q15771 203 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 AKNAD1Q5T1N1 836 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
PALB2-205ENST00000567003 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
PALB2-205ENST00000567003 B4GALT4O60513 344 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 FGBP02675 491 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 GNAT2P19087 354 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 STAG1Q8WVM7 1258 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 SCLYQ96I15 445 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
PALB2-205ENST00000567003 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 ZNF287Q9HBT7 754 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
PALB2-205ENST00000567003 TRANK1O15050 2925 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 ASB14A6NK59 587 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 NMT2O60551 498 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
PALB2-205ENST00000567003 SLC1A4P43007 532 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 PPARAQ07869 468 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 TAPT1Q6NXT6 567 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 MICALL1Q8N3F8 863 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 ADAMTS19Q8TE59 1207 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 VWCEQ96DN2 955 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 ASB2Q96Q27 587 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
PALB2-205ENST00000567003 RCAN3Q9UKA8 241 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 SYNPO2Q9UMS6 1093 aa18.4■□□□□ 0.54
PALB2-205ENST00000567003 TCF20Q9UGU0 1960 aaKnown RBP18.4■□□□□ 0.54
PALB2-205ENST00000567003 SCN5AQ14524 2016 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 PDE4BQ07343 736 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
PALB2-205ENST00000567003 PPP1R13LQ8WUF5 828 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 CHURC1Q8WUH1 139 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
PALB2-205ENST00000567003 GMCL1Q96IK5 515 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 NAPBQ9H115 298 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 SLC28A3Q9HAS3 691 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 CYP39A1Q9NYL5 469 aa18.39■□□□□ 0.53
PALB2-205ENST00000567003 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 CABYRO75952 493 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 FDX1P10109 184 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 CTDSPL2Q05D32 466 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 TKFCQ3LXA3 575 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 NSMFQ6X4W1 530 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 NECAB3Q96P71 396 aaPredicted RBP18.38■□□□□ 0.53
PALB2-205ENST00000567003 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
PALB2-205ENST00000567003 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 STX8Q9UNK0 236 aa18.38■□□□□ 0.53
PALB2-205ENST00000567003 FOXP2O15409 715 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 CYP2C9P11712 490 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 MRPS5P82675 430 aaKnown RBP18.37■□□□□ 0.53
PALB2-205ENST00000567003 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 UHRF1Q96T88 793 aaPredicted RBP18.37■□□□□ 0.53
PALB2-205ENST00000567003 NACAP1Q9BZK3 213 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 TRMT13Q9NUP7 481 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms