RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 PPP1R18Q6NYC8 613 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 FAM200AQ8TCP9 573 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 HOOK2Q96ED9 719 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 MS4A4AQ96JQ5 239 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 BARHL2Q9NY43 387 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 HERC5Q9UII4 1024 aaKnown RBP19.2■□□□□ 0.66
RAB40C-210ENST00000566290 CSADQ9Y600 493 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 TRIM75PA6NK02 468 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 KLRF2D3W0D1 207 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 M0R2N6 131 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 PDHBP11177 359 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 AKR1B1P15121 316 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 MAP3K10Q02779 954 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 TYRO3Q06418 890 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 NR5A1Q13285 461 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 TEX2Q8IWB9 1127 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 FERMT2Q96AC1 680 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 DNAJC18Q9H819 358 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 PCDHA4Q9UN74 947 aa19.19■□□□□ 0.66
RAB40C-210ENST00000566290 SRPRBQ9Y5M8 271 aaKnown RBP19.19■□□□□ 0.66
RAB40C-210ENST00000566290 MYH4Q9Y623 1939 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 SPDYE5A6NIY4 337 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 CYTH3O43739 400 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 SLC35G1Q2M3R5 365 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 STAG2Q8N3U4 1231 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 DPF3Q92784 378 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 PRO3102Q9H379 93 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 KANSL2Q9H9L4 492 aa19.18■□□□□ 0.66
RAB40C-210ENST00000566290 FBXO2Q9UK22 296 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-210ENST00000566290 PFKFB1P16118 471 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 RRP1BQ14684 758 aaKnown RBP19.17■□□□□ 0.66
RAB40C-210ENST00000566290 SASS6Q6UVJ0 657 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 TMEM179Q6ZVK1 233 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 BLIDQ8IZY5 108 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 ZMYND12Q9H0C1 365 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-210ENST00000566290 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
RAB40C-210ENST00000566290 TESPA1A2RU30 521 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-210ENST00000566290 STXBP3O00186 592 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 IRF6O14896 467 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 NDUFA8P51970 172 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 NLRP5P59047 1200 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 SH3TC2Q8TF17 1288 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 DCAF4Q8WV16 495 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 BRI3BPQ8WY22 251 aa19.16■□□□□ 0.66
RAB40C-210ENST00000566290 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
RAB40C-210ENST00000566290 TBC1D12O60347 775 aa19.15■□□□□ 0.66
RAB40C-210ENST00000566290 ATP2C1P98194 919 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-210ENST00000566290 STX1AQ16623 288 aa19.15■□□□□ 0.66
RAB40C-210ENST00000566290 NOL9Q5SY16 702 aaKnown RBP19.15■□□□□ 0.66
RAB40C-210ENST00000566290 ARL6IP4Q66PJ3 421 aaKnown RBP19.15■□□□□ 0.66
RAB40C-210ENST00000566290 WWC2Q6AWC2 1192 aa19.15■□□□□ 0.66
RAB40C-210ENST00000566290 MTMR8Q96EF0 704 aa19.15■□□□□ 0.66
RAB40C-210ENST00000566290 PYM1Q9BRP8 204 aaKnown RBP19.15■□□□□ 0.66
RAB40C-210ENST00000566290 CABP5Q9NP86 173 aa19.15■□□□□ 0.66
RAB40C-210ENST00000566290 SOX1O00570 391 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-210ENST00000566290 ZNF202O95125 648 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 GNA11P29992 359 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-210ENST00000566290 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 FAM13BQ9NYF5 915 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 SEC63Q9UGP8 760 aaKnown RBP19.14■□□□□ 0.65
RAB40C-210ENST00000566290 USP25Q9UHP3 1055 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 PCDHB6Q9Y5E3 794 aa19.14■□□□□ 0.65
RAB40C-210ENST00000566290 CCL15-CCL14A0A0B4J2E2 113 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 A0A1B0GVL5 298 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 LAD1O00515 517 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 SYKP43405 635 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 MNX1P50219 401 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-210ENST00000566290 PPIL2Q13356 520 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 CCL15Q16663 113 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 CERKLQ49MI3 558 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-210ENST00000566290 TTC38Q5R3I4 469 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 KRT25Q7Z3Z0 450 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 BPIFA3Q9BQP9 254 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 GLT8D2Q9H1C3 349 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.13■□□□□ 0.65
RAB40C-210ENST00000566290 ANO10Q9NW15 660 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 TUBE1Q9UJT0 475 aa19.13■□□□□ 0.65
RAB40C-210ENST00000566290 GTF2A2P52657 109 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 PPATQ06203 517 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 CAMK4Q16566 473 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 KANK3Q6NY19 840 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 SCYL3Q8IZE3 742 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 FAM43AQ8N2R8 423 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 LRCH3Q96II8 777 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 GMCL1Q96IK5 515 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 TRIM34Q9BYJ4 488 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 C6orf50Q9HD87 102 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 KIAA1468Q9P260 1216 aa19.12■□□□□ 0.65
RAB40C-210ENST00000566290 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
RAB40C-210ENST00000566290 USP17L5A8MUK1 530 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 PTPRAP18433 802 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-210ENST00000566290 PRPHP41219 470 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms