RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CCDC141Q6ZP82 1450 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 ITGB7P26010 798 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 NFIAQ12857 509 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 NBPF9Q3BBW0 867 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 PAOXQ6QHF9 649 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 NOP9Q86U38 636 aaKnown RBP5.9□□□□□ -1.47
LINC00561-201ENST00000565815 CCDC113Q9H0I3 377 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.47
LINC00561-201ENST00000565815 FBXL21Q9UKT6 434 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 STRCP1A6NGW2 1772 aa5.9□□□□□ -1.47
LINC00561-201ENST00000565815 ERVK-7P63135 1459 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 MSH6P52701 1360 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 KIF3BO15066 747 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 NKPD1Q17RQ9 610 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 ZPBP2Q6X784 338 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 STK17AQ9UEE5 414 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
LINC00561-201ENST00000565815 CD2APQ9Y5K6 639 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 MBD5Q9P267 1494 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 SBNO2Q9Y2G9 1366 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 TGFB1P01137 390 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 CHMP4BP1P59074 171 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 NWD1Q149M9 1564 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 EGFLAMQ63HQ2 1017 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 CLEC10AQ8IUN9 316 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 FIBCD1Q8N539 461 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 LRRIQ1Q96JM4 1722 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 CGGBP1Q9UFW8 167 aaPredicted RBP5.89□□□□□ -1.47
LINC00561-201ENST00000565815 PLAGL2Q9UPG8 496 aa5.89□□□□□ -1.47
LINC00561-201ENST00000565815 NCOA2Q15596 1464 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 KCNH1O95259 989 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 FURINP09958 794 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 IFNGR1P15260 489 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 OGFOD3Q6PK18 319 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 PHLPP1O60346 1717 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 UBR1Q8IWV7 1749 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 MAST1Q9Y2H9 1570 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 STXBP3O00186 592 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 KCNMA1Q12791 1236 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 IFRD2Q12894 506 aaPredicted RBP5.88□□□□□ -1.47
LINC00561-201ENST00000565815 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 FAM126AQ9BYI3 521 aaPredicted RBP5.88□□□□□ -1.47
LINC00561-201ENST00000565815 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 ROBO1Q9Y6N7 1651 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 PRDM15P57071 1507 aaPredicted RBP5.88□□□□□ -1.47
LINC00561-201ENST00000565815 EHBP1L1Q8N3D4 1523 aa5.88□□□□□ -1.47
LINC00561-201ENST00000565815 CEP162Q5TB80 1403 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 SHPRHQ149N8 1683 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 TSPY4P0CV99 314 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 TSPY10P0CW01 314 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 RSPO4Q2I0M5 234 aaPredicted RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 MEX3CQ5U5Q3 659 aaKnown RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 SPACA3Q8IXA5 215 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 C7orf61Q8IZ16 206 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 RNF141Q8WVD5 230 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 IER2Q9BTL4 223 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 YIPF2Q9BWQ6 316 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 LRP2BPQ9P2M1 347 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 SLC12A7Q9Y666 1083 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 CAPN6Q9Y6Q1 641 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 XIRP1Q702N8 1843 aaKnown RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 H3BS24 57 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 RNF225M0QZC1 329 aaPredicted RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 CCNFP41002 786 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 C2orf27AQ580R0 203 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 MKL1Q969V6 931 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 PCDHB12Q9Y5F1 795 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 AHDC1Q5TGY3 1603 aaPredicted RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 MTUS2Q5JR59 1369 aa5.87□□□□□ -1.47
LINC00561-201ENST00000565815 SETD1AO15047 1707 aaKnown RBP5.87□□□□□ -1.47
LINC00561-201ENST00000565815 ANKRD34BA5PLL1 514 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 ARNTLO00327 626 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 ASMTLO95671 621 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 OXCT1P55809 520 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 SFRP5Q5T4F7 317 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 MFSD4AQ8N468 514 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 FAM181BA6NEQ2 426 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 FKTNO75072 461 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 NCAPHQ15003 741 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 NOL9Q5SY16 702 aaKnown RBP5.86□□□□□ -1.47
LINC00561-201ENST00000565815 RNF43Q68DV7 783 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 HSPA12BQ96MM6 686 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 CLUHP3Q96NS8 147 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 SPATA9Q9BWV2 254 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 HDAC8Q9BY41 377 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 TMEM94Q12767 1356 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 TIAM1Q13009 1591 aa5.86□□□□□ -1.47
LINC00561-201ENST00000565815 NMIQ13287 307 aaPredicted RBP5.85□□□□□ -1.47
LINC00561-201ENST00000565815 ST13P5Q8NFI4 369 aaPredicted RBP5.85□□□□□ -1.47
LINC00561-201ENST00000565815 FBXL18Q96ME1 805 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 DUSP15Q9H1R2 295 aaPredicted RBP5.85□□□□□ -1.47
LINC00561-201ENST00000565815 ST14Q9Y5Y6 855 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 PIK3R4Q99570 1358 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 TMEM2Q9UHN6 1383 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 ZDHHC13Q8IUH4 622 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms