RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 GLRX3O76003 335 aaKnown RBP10.16□□□□□ -0.78
CDH13-207ENST00000565636 PICALMQ13492 652 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
CDH13-207ENST00000565636 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 ZNF384Q8TF68 577 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 ACDQ96AP0 544 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 PAWRQ96IZ0 340 aaKnown RBP10.16□□□□□ -0.78
CDH13-207ENST00000565636 MEIS3Q99687 375 aa10.16□□□□□ -0.78
CDH13-207ENST00000565636 OXCT2Q9BYC2 517 aaPredicted RBP10.16□□□□□ -0.78
CDH13-207ENST00000565636 SIPA1L1O43166 1804 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 MSCO60682 206 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 ELNP15502 786 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 USP14P54578 494 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 HMGCS2P54868 508 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 CCNA1P78396 465 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
CDH13-207ENST00000565636 TREML2Q5T2D2 321 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 NAA16Q6N069 864 aaPredicted RBP10.15□□□□□ -0.78
CDH13-207ENST00000565636 TEX11Q8IYF3 940 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 SSH3Q8TE77 659 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 RHBDD1Q8TEB9 315 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 USP6NLQ92738 828 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 C12orf42Q96LP6 360 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 RAI14Q9P0K7 980 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
CDH13-207ENST00000565636 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
CDH13-207ENST00000565636 DDX60LQ5H9U9 1706 aaKnown RBP10.14□□□□□ -0.79
CDH13-207ENST00000565636 HLA-DOAP06340 250 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 RGS2P41220 211 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 MCAMP43121 646 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 HERVK_113P62684 666 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 FAM109BQ6ICB4 259 aaPredicted RBP10.14□□□□□ -0.79
CDH13-207ENST00000565636 TATDN1Q6P1N9 297 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 EHD4Q9H223 541 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 GDF2Q9UK05 429 aaPredicted RBP10.14□□□□□ -0.79
CDH13-207ENST00000565636 HRH3Q9Y5N1 445 aa10.14□□□□□ -0.79
CDH13-207ENST00000565636 OIP5O43482 229 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 STRNO43815 780 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 HOXC6P09630 235 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 COL6A1P12109 1028 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 SOX11P35716 441 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 TLR1Q15399 786 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 MAP7D1Q3KQU3 841 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 C4orf17Q53FE4 359 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 TTC6Q86TZ1 520 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 PHTF2Q8N3S3 785 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 P2RX7Q99572 595 aaKnown RBP10.13□□□□□ -0.79
CDH13-207ENST00000565636 RBPJLQ9UBG7 517 aa10.13□□□□□ -0.79
CDH13-207ENST00000565636 FRMPD3Q5JV73 1810 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 MYH8P13535 1937 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 ERVK-24P63145 666 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 SEMA3FQ13275 785 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 PLEKHH3Q7Z736 793 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
CDH13-207ENST00000565636 TDHQ8IZJ6 230 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 CRACR2BQ8N4Y2 399 aaPredicted RBP10.12□□□□□ -0.79
CDH13-207ENST00000565636 KIAA1683Q9H0B3 1180 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 STAP2Q9UGK3 403 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 ATXN7L1Q9ULK2 861 aaPredicted RBP10.12□□□□□ -0.79
CDH13-207ENST00000565636 A0A0C4DFX4 3053 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 COL6A3P12111 3177 aa10.12□□□□□ -0.79
CDH13-207ENST00000565636 CNTNAP5Q8WYK1 1306 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 SLC15A5A6NIM6 579 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 TRIM27P14373 513 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 MSX1P28360 303 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 TNNI3KQ59H18 835 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 TTC39AQ5SRH9 613 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 FIGNL1Q6PIW4 674 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 CATSPERGQ6ZRH7 1159 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 SH3RF3Q8TEJ3 882 aaPredicted RBP10.11□□□□□ -0.79
CDH13-207ENST00000565636 TGFBRAP1Q8WUH2 860 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 TRIB2Q92519 343 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 EDC3Q96F86 508 aaKnown RBP10.11□□□□□ -0.79
CDH13-207ENST00000565636 APBA2Q99767 749 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 RUBCNLQ9H714 662 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 ETNK1Q9HBU6 452 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 AATFQ9NY61 560 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDH13-207ENST00000565636 SERPINB13Q9UIV8 391 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 STXBP5LQ9Y2K9 1186 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 FPGT-TNNI3KV9GXZ4 949 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 CUL9Q8IWT3 2517 aa10.11□□□□□ -0.79
CDH13-207ENST00000565636 RLFQ13129 1914 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms