RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MRPL4Q9BYD3 311 aaKnown RBP6.91□□□□□ -1.3
CDH1-207ENST00000564745 SPC25Q9HBM1 224 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 CLEC1BQ9P126 229 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 DUSP13Q9UII6 198 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 DNAJC25-GNG10A0A024R161 153 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.9□□□□□ -1.3
CDH1-207ENST00000564745 TMEM82A0PJX8 343 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PPM1GO15355 546 aaPredicted RBP6.9□□□□□ -1.3
CDH1-207ENST00000564745 RFPL3O75679 317 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PLS3P13797 630 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 LTKP29376 864 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PCBP3P57721 371 aaKnown RBP6.9□□□□□ -1.3
CDH1-207ENST00000564745 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDH1-207ENST00000564745 BRAPQ7Z569 592 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 CCDC103Q8IW40 242 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PPIL6Q8IXY8 311 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 MFSD3Q96ES6 412 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 SCLYQ96I15 445 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 TRIM39Q9HCM9 518 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 SFMBT1Q9UHJ3 866 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PLAAQ9Y263 795 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
CDH1-207ENST00000564745 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 A0A087X0B3 334 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 DNAJC8O75937 253 aaPredicted RBP6.89□□□□□ -1.31
CDH1-207ENST00000564745 CPP00450 1065 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
CDH1-207ENST00000564745 LCP1P13796 627 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
CDH1-207ENST00000564745 TEKQ02763 1124 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 EGR3Q06889 387 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 BNIP3Q12983 259 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 TRIM61Q5EBN2 209 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 CDADC1Q9BWV3 514 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 FAM126AQ9BYI3 521 aaPredicted RBP6.89□□□□□ -1.31
CDH1-207ENST00000564745 COL4A3BPQ9Y5P4 624 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 SNX11Q9Y5W9 270 aa6.89□□□□□ -1.31
CDH1-207ENST00000564745 SSU72P8A0A1W2PR75 194 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 FAM83GA6ND36 823 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 MSCO60682 206 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 RASGRP1O95267 797 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 SEPHS1P49903 392 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 GABREP78334 506 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 AOC3Q16853 763 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 RCSD1Q6JBY9 416 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 THNSL2Q86YJ6 484 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 UBR7Q8N806 425 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 PTPRN2Q92932 1015 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
CDH1-207ENST00000564745 FGF10O15520 208 aaPredicted RBP6.87□□□□□ -1.31
CDH1-207ENST00000564745 KCNQ2O43526 872 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 RPL10P27635 214 aaKnown RBP6.87□□□□□ -1.31
CDH1-207ENST00000564745 CEBPAP49715 358 aaPredicted RBP6.87□□□□□ -1.31
CDH1-207ENST00000564745 AMPD3Q01432 767 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 ZNF460Q14592 562 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 INF2Q27J81 1249 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 RNF111Q6ZNA4 994 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 TMPRSS7Q7RTY8 843 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 TMEM52Q8NDY8 209 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 HRASLS5Q96KN8 279 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 TARS2Q9BW92 718 aaKnown RBP6.87□□□□□ -1.31
CDH1-207ENST00000564745 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 RNF112Q9ULX5 631 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 PCDHA9Q9Y5H5 950 aa6.87□□□□□ -1.31
CDH1-207ENST00000564745 TNPO3Q9Y5L0 923 aaKnown RBP6.87□□□□□ -1.31
CDH1-207ENST00000564745 MEFVO15553 781 aaPredicted RBP6.86□□□□□ -1.31
CDH1-207ENST00000564745 PDE8AO60658 829 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 MED26O95402 600 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 CRTAMO95727 393 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
CDH1-207ENST00000564745 ITGB7P26010 798 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 EEF1DP3Q658K8 133 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 WAPLQ7Z5K2 1190 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 LRRTM3Q86VH5 581 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 KSR1Q8IVT5 923 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 DCAF4Q8WV16 495 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 PTCHD1Q96NR3 888 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 EBF1Q9UH73 591 aa6.86□□□□□ -1.31
CDH1-207ENST00000564745 GSG1L2A8MUP6 293 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
CDH1-207ENST00000564745 PRKCQQ04759 706 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 TAF7LQ5H9L4 462 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 ACBD5Q5T8D3 534 aaPredicted RBP6.85□□□□□ -1.31
CDH1-207ENST00000564745 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
CDH1-207ENST00000564745 SPRED2Q7Z698 418 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 WFDC3Q8IUB2 231 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 KRTAP1-3Q8IUG1 177 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
CDH1-207ENST00000564745 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms