RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 USH1GQ495M9 461 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 MUM1L1Q5H9M0 696 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 PRPF38BQ5VTL8 546 aaKnown RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 LHX8Q68G74 356 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 MB21D2Q8IYB1 491 aaPredicted RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 TRPV1Q8NER1 839 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 MTA3Q9BTC8 594 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 CPVLQ9H3G5 476 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 C11orf49Q9H6J7 331 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 ADD3Q9UEY8 706 aaKnown RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
CNOT1-206ENST00000564557 NR2E3Q9Y5X4 410 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 WDR19Q8NEZ3 1342 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 AKR1A1P14550 325 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 CNTN2Q02246 1040 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 KRT32Q14532 448 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 CTCFLQ8NI51 663 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-206ENST00000564557 ABHD16BQ9H3Z7 469 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 CYP39A1Q9NYL5 469 aa15.91■□□□□ 0.14
CNOT1-206ENST00000564557 PDE4DIPQ5VU43 2346 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 KBTBD13C9JR72 458 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 EVI5O60447 810 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 IGHA2P01877 340 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 CALML3P27482 149 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 KIF5BP33176 963 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 TRAF1Q13077 416 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 BAATQ14032 418 aaPredicted RBP15.9■□□□□ 0.14
CNOT1-206ENST00000564557 SYNE3Q6ZMZ3 975 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 UBE2Q1Q7Z7E8 422 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 FBXO11Q86XK2 927 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 FAM133AQ8N9E0 248 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 DIS3LQ8TF46 1054 aaKnown RBP15.9■□□□□ 0.14
CNOT1-206ENST00000564557 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
CNOT1-206ENST00000564557 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 ABCB11O95342 1321 aa15.9■□□□□ 0.14
CNOT1-206ENST00000564557 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
CNOT1-206ENST00000564557 B4DLN1 442 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 TAL1P17542 331 aaPredicted RBP15.89■□□□□ 0.13
CNOT1-206ENST00000564557 MRPL12P52815 198 aaKnown RBP15.89■□□□□ 0.13
CNOT1-206ENST00000564557 ANTXR2P58335 489 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 FGD1P98174 961 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 ACVR2BQ13705 512 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 GRM4Q14833 912 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 MCF2L2Q86YR7 1114 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 CCDC144CPQ8IYA2 1237 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 AMNQ9BXJ7 453 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 JMJD4Q9H9V9 463 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 XPNPEP3Q9NQH7 507 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 MAD2L2Q9UI95 211 aa15.89■□□□□ 0.13
CNOT1-206ENST00000564557 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
CNOT1-206ENST00000564557 DNM1LO00429 736 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 NFIBO00712 420 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 DDAH1O94760 285 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 ZNF865P0CJ78 1059 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 CALM1P0DP23 149 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 CALM2P0DP24 149 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 CALM3P0DP25 149 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 QRICH1Q2TAL8 776 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 NOL8Q76FK4 1167 aaKnown RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 RNF180Q86T96 592 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 HOMER1Q86YM7 354 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 ZNF654Q8IZM8 581 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SENP6Q9GZR1 1112 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-206ENST00000564557 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SPC25Q9HBM1 224 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SENP2Q9HC62 589 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SLC12A7Q9Y666 1083 aa15.88■□□□□ 0.13
CNOT1-206ENST00000564557 SOWAHBA6NEL2 793 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 SH2B2O14492 632 aaPredicted RBP15.87■□□□□ 0.13
CNOT1-206ENST00000564557 ZBTB5O15062 677 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 LIFRP42702 1097 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 GNAQP50148 359 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 TROAPQ12815 778 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 LZTS2Q9BRK4 669 aa15.87■□□□□ 0.13
CNOT1-206ENST00000564557 BRCA2P51587 3418 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 RPS6P62753 249 aaKnown RBP15.86■□□□□ 0.13
CNOT1-206ENST00000564557 TSGA10IPQ3SY00 556 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
CNOT1-206ENST00000564557 RGS22Q8NE09 1264 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 CLEC4DQ8WXI8 215 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 LRRC2Q9BYS8 371 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 MAF1Q9H063 256 aa15.86■□□□□ 0.13
CNOT1-206ENST00000564557 LOC102724159A0A0B4J2E5 919 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms