RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 RBM5P52756 815 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCF4-222ENST00000564228 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
TCF4-222ENST00000564228 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 PPFIBP1Q86W92 1011 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 NOA1Q8NC60 698 aaKnown RBP12.39□□□□□ -0.43
TCF4-222ENST00000564228 GIMAP7Q8NHV1 300 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 RUBCNQ92622 972 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
TCF4-222ENST00000564228 PAGR1Q9BTK6 254 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 ZMYM6O95789 1325 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 CRKP46108 304 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 PPP4CP60510 307 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 PDE4BQ07343 736 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 SLC4A8Q2Y0W8 1093 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 NT5DC1Q5TFE4 455 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 SHC4Q6S5L8 630 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 CRACR2AQ9BSW2 395 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 CAPS2Q9BXY5 557 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 DCP1AQ9NPI6 582 aaPredicted RBP12.39□□□□□ -0.43
TCF4-222ENST00000564228 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
TCF4-222ENST00000564228 NFE2L3Q9Y4A8 694 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 GOLGA6CA6NDK9 693 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 KIF3CO14782 793 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 CHUKO15111 745 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 MFAP3LO75121 409 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
TCF4-222ENST00000564228 GOLGA6DP0CG33 693 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 PLCG2P16885 1265 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
TCF4-222ENST00000564228 PBX1P40424 430 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 PRELPP51888 382 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
TCF4-222ENST00000564228 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 GOLGA6AQ9NYA3 693 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 MCM8Q9UJA3 840 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 TIAM2Q8IVF5 1701 aa12.38□□□□□ -0.43
TCF4-222ENST00000564228 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 USP17L21D6R901 530 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 ERCC5P28715 1186 aaPredicted RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 ELF1P32519 619 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 SKOR1P84550 965 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 CXCL9Q07325 125 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PPARAQ07869 468 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PTPAQ15257 358 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PREPLQ4J6C6 727 aaPredicted RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 YTHDF3Q7Z739 585 aaKnown RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 TMTC1Q8IUR5 882 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 KIF28PB7ZC32 967 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 SMIM22K7EJ46 135 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 PPP1R12AO14974 1030 aaPredicted RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 ZEB2O60315 1214 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 BMP6P22004 513 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 GGCXP38435 758 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 RHBDL3P58872 404 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 CKAP4Q07065 602 aaKnown RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 PTPN21Q16825 1174 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 CIAPIN1Q6FI81 312 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
TCF4-222ENST00000564228 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 SH3GL2Q99962 352 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
TCF4-222ENST00000564228 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
TCF4-222ENST00000564228 AGPSO00116 658 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 KIAA0754O94854 1291 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-222ENST00000564228 ERCC3P19447 782 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 CDC27P30260 824 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
TCF4-222ENST00000564228 PLCD1P51178 756 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 PICALMQ13492 652 aa12.36□□□□□ -0.43
TCF4-222ENST00000564228 MORC3Q14149 939 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms