RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ANTXR2P58335 489 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 USH1GQ495M9 461 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 TMEM67Q5HYA8 995 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 CREB3L3Q68CJ9 461 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 LENG1Q96BZ8 264 aaPredicted RBP35.89■■■■□ 3.34
CMTM4-204ENST00000563952 SENP6Q9GZR1 1112 aaPredicted RBP35.89■■■■□ 3.34
CMTM4-204ENST00000563952 VAT1LQ9HCJ6 419 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 XPNPEP3Q9NQH7 507 aa35.89■■■■□ 3.34
CMTM4-204ENST00000563952 KBTBD13C9JR72 458 aa35.88■■■■□ 3.33
CMTM4-204ENST00000563952 ACVR2BQ13705 512 aa35.88■■■■□ 3.33
CMTM4-204ENST00000563952 BAATQ14032 418 aaPredicted RBP35.88■■■■□ 3.33
CMTM4-204ENST00000563952 C7orf61Q8IZ16 206 aa35.88■■■■□ 3.33
CMTM4-204ENST00000563952 STAG2Q8N3U4 1231 aa35.88■■■■□ 3.33
CMTM4-204ENST00000563952 FAM184BQ9ULE4 1060 aa35.88■■■■□ 3.33
CMTM4-204ENST00000563952 PTPDC1A2A3K4 754 aa35.87■■■■□ 3.33
CMTM4-204ENST00000563952 CENPBP07199 599 aaPredicted RBP35.87■■■■□ 3.33
CMTM4-204ENST00000563952 NECTIN1Q15223 517 aa35.87■■■■□ 3.33
CMTM4-204ENST00000563952 CLEC4DQ8WXI8 215 aa35.87■■■■□ 3.33
CMTM4-204ENST00000563952 PURBQ96QR8 312 aaKnown RBP35.87■■■■□ 3.33
CMTM4-204ENST00000563952 ABHD16BQ9H3Z7 469 aa35.87■■■■□ 3.33
CMTM4-204ENST00000563952 ASB14A6NK59 587 aa35.86■■■■□ 3.33
CMTM4-204ENST00000563952 LCTP09848 1927 aa35.86■■■■□ 3.33
CMTM4-204ENST00000563952 PGK1P00558 417 aa35.85■■■■□ 3.33
CMTM4-204ENST00000563952 LRRC41Q15345 812 aa35.85■■■■□ 3.33
CMTM4-204ENST00000563952 JMJD4Q9H9V9 463 aa35.85■■■■□ 3.33
CMTM4-204ENST00000563952 MAD2L2Q9UI95 211 aa35.85■■■■□ 3.33
CMTM4-204ENST00000563952 DDX49Q9Y6V7 483 aaKnown RBP35.85■■■■□ 3.33
CMTM4-204ENST00000563952 ASTN1O14525 1302 aa35.84■■■■□ 3.33
CMTM4-204ENST00000563952 KLRF2D3W0D1 207 aa35.84■■■■□ 3.33
CMTM4-204ENST00000563952 LRRC26Q2I0M4 334 aa35.84■■■■□ 3.33
CMTM4-204ENST00000563952 SLC30A10Q6XR72 485 aa35.84■■■■□ 3.33
CMTM4-204ENST00000563952 IGDCC4Q8TDY8 1250 aa35.84■■■■□ 3.33
CMTM4-204ENST00000563952 MYH6P13533 1939 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 PRC1O43663 620 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 CALML3P27482 149 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 GRM4Q14833 912 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 QRICH1Q2TAL8 776 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 RNF207Q6ZRF8 634 aa35.83■■■■□ 3.33
CMTM4-204ENST00000563952 ATN1P54259 1190 aaPredicted RBP35.82■■■■□ 3.32
CMTM4-204ENST00000563952 CCDC144BQ3MJ40 725 aa35.82■■■■□ 3.32
CMTM4-204ENST00000563952 CATIPQ7Z7H3 387 aa35.82■■■■□ 3.32
CMTM4-204ENST00000563952 CEP290O15078 2479 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 PALM3A6NDB9 673 aaPredicted RBP35.81■■■■□ 3.32
CMTM4-204ENST00000563952 MCM5P33992 734 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 RNF20Q5VTR2 975 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 RNF180Q86T96 592 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 KATNBL1Q9H079 304 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 GPHNQ9NQX3 736 aaPredicted RBP35.81■■■■□ 3.32
CMTM4-204ENST00000563952 PPP4R2Q9NY27 417 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 ADD3Q9UEY8 706 aaKnown RBP35.81■■■■□ 3.32
CMTM4-204ENST00000563952 ABCB11O95342 1321 aa35.81■■■■□ 3.32
CMTM4-204ENST00000563952 FBXO11Q86XK2 927 aa35.8■■■■□ 3.32
CMTM4-204ENST00000563952 LY9Q9HBG7 655 aa35.8■■■■□ 3.32
CMTM4-204ENST00000563952 ADCYAP1R1P41586 468 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 RPS6P62753 249 aaKnown RBP35.79■■■■□ 3.32
CMTM4-204ENST00000563952 TROAPQ12815 778 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 COL9A3Q14050 684 aaPredicted RBP35.79■■■■□ 3.32
CMTM4-204ENST00000563952 NUP133Q8WUM0 1156 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 FERMT2Q96AC1 680 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 ZMYND8Q9ULU4 1186 aaPredicted RBP35.79■■■■□ 3.32
CMTM4-204ENST00000563952 COLQQ9Y215 455 aaPredicted RBP35.79■■■■□ 3.32
CMTM4-204ENST00000563952 LRRC37A2A6NM11 1700 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 SYNRGQ9UMZ2 1314 aa35.79■■■■□ 3.32
CMTM4-204ENST00000563952 ALDH5A1P51649 535 aaPredicted RBP35.78■■■■□ 3.32
CMTM4-204ENST00000563952 CHRDL2Q6WN34 429 aa35.78■■■■□ 3.32
CMTM4-204ENST00000563952 EEPD1Q7L9B9 569 aa35.78■■■■□ 3.32
CMTM4-204ENST00000563952 ADCY6O43306 1168 aa35.77■■■■□ 3.32
CMTM4-204ENST00000563952 DUSP11O75319 330 aaKnown RBP35.77■■■■□ 3.32
CMTM4-204ENST00000563952 NFXL1Q6ZNB6 911 aa35.77■■■■□ 3.32
CMTM4-204ENST00000563952 MTA3Q9BTC8 594 aa35.77■■■■□ 3.32
CMTM4-204ENST00000563952 SH2B2O14492 632 aaPredicted RBP35.76■■■■□ 3.32
CMTM4-204ENST00000563952 ADAMTS4O75173 837 aa35.76■■■■□ 3.32
CMTM4-204ENST00000563952 FBXO16Q8IX29 292 aaPredicted RBP35.76■■■■□ 3.32
CMTM4-204ENST00000563952 ZNF654Q8IZM8 581 aa35.76■■■■□ 3.32
CMTM4-204ENST00000563952 TMEM87BQ96K49 555 aa35.76■■■■□ 3.32
CMTM4-204ENST00000563952 MYL10Q9BUA6 226 aa35.76■■■■□ 3.32
CMTM4-204ENST00000563952 SYN1P17600 705 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 ERICH6BQ5W0A0 696 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 NOL8Q76FK4 1167 aaKnown RBP35.75■■■■□ 3.31
CMTM4-204ENST00000563952 HOMER1Q86YM7 354 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 RGS22Q8NE09 1264 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 AMNQ9BXJ7 453 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 PHF24Q9UPV7 400 aa35.75■■■■□ 3.31
CMTM4-204ENST00000563952 MRPL11Q9Y3B7 192 aaKnown RBP35.75■■■■□ 3.31
CMTM4-204ENST00000563952 C11orf97A0A1B0GVM6 126 aaPredicted RBP35.74■■■■□ 3.31
CMTM4-204ENST00000563952 ZBTB5O15062 677 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 TNFAIP2Q03169 654 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 SLC35G1Q2M3R5 365 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 MORC4Q8TE76 937 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 MTMR8Q96EF0 704 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 LRRC2Q9BYS8 371 aa35.74■■■■□ 3.31
CMTM4-204ENST00000563952 CCDC69A6NI79 296 aa35.73■■■■□ 3.31
CMTM4-204ENST00000563952 C6orf222P0C671 652 aaPredicted RBP35.73■■■■□ 3.31
CMTM4-204ENST00000563952 SLC39A5Q6ZMH5 540 aa35.73■■■■□ 3.31
CMTM4-204ENST00000563952 TBC1D5Q92609 795 aa35.73■■■■□ 3.31
CMTM4-204ENST00000563952 PDGFCQ9NRA1 345 aa35.73■■■■□ 3.31
CMTM4-204ENST00000563952 MYADML2A6NDP7 307 aa35.72■■■■□ 3.31
CMTM4-204ENST00000563952 DDAH1O94760 285 aa35.72■■■■□ 3.31
CMTM4-204ENST00000563952 RTP1P59025 263 aa35.72■■■■□ 3.31
CMTM4-204ENST00000563952 MCF2L2Q86YR7 1114 aa35.72■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms