RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 RNF40O75150 1001 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 CAMTA2O94983 1202 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 TYW1BQ6NUM6 668 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 LZTS2Q9BRK4 669 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 MST1RQ04912 1400 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 ENC1O14682 589 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 DCAF17Q5H9S7 520 aaPredicted RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 C2CD5Q86YS7 1000 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 COA7Q96BR5 231 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 FBXO2Q9UK22 296 aaPredicted RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 PIK3C2AO00443 1686 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 B4DLN1 442 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 FMR1Q06787 632 aaKnown RBP eCLIP11.61□□□□□ -0.554e-6■■■□□ 16.3
RNF40-204ENST00000563683 PLS1Q14651 629 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 EPN1Q9Y6I3 576 aaPredicted RBP11.61□□□□□ -0.55
RNF40-204ENST00000563683 PNPLA7Q6ZV29 1317 aa11.61□□□□□ -0.55
RNF40-204ENST00000563683 PP2D1A8MPX8 630 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF40-204ENST00000563683 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 LRP10Q7Z4F1 713 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 ZNF512BQ96KM6 892 aaPredicted RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 PIGSQ96S52 555 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 XDHP47989 1333 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 LOC102724159A0A0B4J2E5 919 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 A0A1B0GTH6 734 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 ERLIN2O94905 339 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 CDR1P51861 262 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 MTF1Q14872 753 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 PWP2Q15269 919 aaKnown RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 ANKRD13CQ8N6S4 541 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 PLEKHA4Q9H4M7 779 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 SUGCTQ9HAC7 445 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 VEZTQ9HBM0 779 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 BCCIPQ9P287 314 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF40-204ENST00000563683 FER1L4A9Z1Z3 1794 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
RNF40-204ENST00000563683 EBAG9O00559 213 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 CHMP2AO43633 222 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 PTPAQ15257 358 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 CCDC65Q8IXS2 484 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 STAG2Q8N3U4 1231 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 SLC16A2P36021 539 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 MAGEA1P43355 309 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 KRT31Q15323 416 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 GPATCH11Q8N954 259 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 TBC1D22AQ8WUA7 517 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 PKD2L1Q9P0L9 805 aa11.6□□□□□ -0.55
RNF40-204ENST00000563683 TRIM49BA6NDI0 452 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 DNM2P50570 870 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
RNF40-204ENST00000563683 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
RNF40-204ENST00000563683 MYO6Q9UM54 1294 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 PCDHA12Q9UN75 941 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
RNF40-204ENST00000563683 NTSR2O95665 410 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 FOXP4Q8IVH2 680 aaPredicted RBP11.59□□□□□ -0.55
RNF40-204ENST00000563683 IFT81Q8WYA0 676 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 TNIP1Q15025 636 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 LRRC41Q15345 812 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 NT5DC1Q5TFE4 455 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 ZNF658Q5TYW1 1059 aaPredicted RBP11.59□□□□□ -0.55
RNF40-204ENST00000563683 FAM76AQ8TAV0 307 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 RPGRIP1Q96KN7 1286 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 NARFQ9UHQ1 456 aa11.59□□□□□ -0.55
RNF40-204ENST00000563683 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 SERPINB2P05120 415 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 PFKFB3Q16875 520 aaPredicted RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 DGKHQ86XP1 1220 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 ARHGEF1Q92888 912 aaKnown RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 MFAP3LO75121 409 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 PLCG1P19174 1290 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 KLRK1P26718 216 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 CDK8P49336 464 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms