RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 BADQ92934 168 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 MMP19Q99542 508 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 MTA3Q9BTC8 594 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 GPCPD1Q9NPB8 672 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 SLC5A4Q9NY91 659 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 CDH23Q9H251 3354 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 TRIM43BA6NCK2 446 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 PGK2P07205 417 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 KCTD2Q14681 263 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 ASPRV1Q53RT3 343 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDT1-202ENST00000562747 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDT1-202ENST00000562747 CHST13Q8NET6 341 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 TRIM43Q96BQ3 446 aaPredicted RBP19.36■□□□□ 0.69
CDT1-202ENST00000562747 RANBP17Q9H2T7 1088 aaKnown RBP19.36■□□□□ 0.69
CDT1-202ENST00000562747 FBXO40Q9UH90 709 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
CDT1-202ENST00000562747 ZNF536O15090 1300 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 REC8O95072 547 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
CDT1-202ENST00000562747 ITGB8P26012 769 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 SLC16A2P36021 539 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 ANTXR2P58335 489 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 WTAPQ15007 396 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 TKFCQ3LXA3 575 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 ZNF697Q5TEC3 545 aa19.35■□□□□ 0.69
CDT1-202ENST00000562747 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
CDT1-202ENST00000562747 PARP1P09874 1014 aaKnown RBP19.34■□□□□ 0.69
CDT1-202ENST00000562747 MCM5P33992 734 aa19.34■□□□□ 0.69
CDT1-202ENST00000562747 TSGA10IPQ3SY00 556 aa19.34■□□□□ 0.69
CDT1-202ENST00000562747 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
CDT1-202ENST00000562747 PHF24Q9UPV7 400 aa19.34■□□□□ 0.69
CDT1-202ENST00000562747 EPB41L2O43491 1005 aaKnown RBP19.33■□□□□ 0.68
CDT1-202ENST00000562747 ICAM1P05362 532 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 SLC4A3P48751 1232 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 TMEM67Q5HYA8 995 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 C1orf53Q5VUE5 145 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 CCDC174Q6PII3 467 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 CHST3Q7LGC8 479 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 TMEM87BQ96K49 555 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 AGBL1Q96MI9 1066 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 CDX2Q99626 313 aaPredicted RBP19.33■□□□□ 0.68
CDT1-202ENST00000562747 XPNPEP3Q9NQH7 507 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 PNMA2Q9UL42 364 aa19.33■□□□□ 0.68
CDT1-202ENST00000562747 DIS3Q9Y2L1 958 aaKnown RBP19.33■□□□□ 0.68
CDT1-202ENST00000562747 SPTBN5Q9NRC6 3674 aaKnown RBP19.33■□□□□ 0.68
CDT1-202ENST00000562747 PRC1O43663 620 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 PGK1P00558 417 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 GOLGA8HP0CJ92 632 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 SNAP25P60880 206 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 TLE2Q04725 743 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 KRT32Q14532 448 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 TTYH1Q9H313 450 aaPredicted RBP19.32■□□□□ 0.68
CDT1-202ENST00000562747 ACAD9Q9H845 621 aa19.32■□□□□ 0.68
CDT1-202ENST00000562747 VCANP13611 3396 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 EPHB4P54760 987 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 TMTC2Q8N394 836 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 DDX11Q96FC9 970 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 NEK1Q96PY6 1258 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 TINF2Q9BSI4 451 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 SEMA6BQ9H3T3 888 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
CDT1-202ENST00000562747 WDR19Q8NEZ3 1342 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 DNAJC25-GNG10A0A024R161 153 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 A0A1W2PQ45 241 aaPredicted RBP19.3■□□□□ 0.68
CDT1-202ENST00000562747 A0A1W2PQY0 241 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 ZNF865P0CJ78 1059 aaPredicted RBP19.3■□□□□ 0.68
CDT1-202ENST00000562747 RARBP10826 455 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 ALAS1P13196 640 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 HSPA4P34932 840 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 ANKRD35Q8N283 1001 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 KCNB2Q92953 911 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 TRERF1Q96PN7 1200 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 LY9Q9HBG7 655 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 SENP2Q9HC62 589 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 HOMER2Q9NSB8 354 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
CDT1-202ENST00000562747 PALM3A6NDB9 673 aaPredicted RBP19.29■□□□□ 0.68
CDT1-202ENST00000562747 SH2B2O14492 632 aaPredicted RBP19.29■□□□□ 0.68
CDT1-202ENST00000562747 LIFRP42702 1097 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 SMAD3P84022 425 aaKnown RBP19.29■□□□□ 0.68
CDT1-202ENST00000562747 TROAPQ12815 778 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 GRM4Q14833 912 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 MYLIPQ8WY64 445 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 MAD2L2Q9UI95 211 aa19.29■□□□□ 0.68
CDT1-202ENST00000562747 KLRF2D3W0D1 207 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 ADAMTS4O75173 837 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
CDT1-202ENST00000562747 CLTBP09497 229 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 ADGRF4Q8IZF3 695 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 STAG2Q8N3U4 1231 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 MSL3Q8N5Y2 521 aaKnown RBP19.28■□□□□ 0.68
CDT1-202ENST00000562747 MAFAQ8NHW3 353 aaPredicted RBP19.28■□□□□ 0.68
CDT1-202ENST00000562747 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms