RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 DDX20Q9UHI6 824 aaKnown RBP17.94■□□□□ 0.46
CCNDBP1-203ENST00000562553 COLQQ9Y215 455 aaPredicted RBP17.94■□□□□ 0.46
CCNDBP1-203ENST00000562553 LRRC37A2A6NM11 1700 aa17.94■□□□□ 0.46
CCNDBP1-203ENST00000562553 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 DHX16O60231 1041 aaKnown RBP17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 QRICH1Q2TAL8 776 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 TSGA10IPQ3SY00 556 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 USH1GQ495M9 461 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 KCNB2Q92953 911 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 TMEM87BQ96K49 555 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 PURBQ96QR8 312 aaKnown RBP17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 CYP39A1Q9NYL5 469 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 ASTN1O14525 1302 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 PFASO15067 1338 aa17.93■□□□□ 0.46
CCNDBP1-203ENST00000562553 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 REC8O95072 547 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 HSPA4P34932 840 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 CATIPQ7Z7H3 387 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 ZNF467Q7Z7K2 595 aaPredicted RBP17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
CCNDBP1-203ENST00000562553 SEPT4O43236 478 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 DDAH1O94760 285 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 ZNF865P0CJ78 1059 aaPredicted RBP17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 NFXL1Q6ZNB6 911 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 RAB11FIP4Q86YS3 637 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 MSL3Q8N5Y2 521 aaKnown RBP17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 MTMR8Q96EF0 704 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 SNX14Q9Y5W7 946 aa17.91■□□□□ 0.46
CCNDBP1-203ENST00000562553 CYTH3O43739 400 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 PPP1R11O60927 126 aaPredicted RBP17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 CPA1P15085 419 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 RXRAP19793 462 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 LIFRP42702 1097 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 EXOSC10Q01780 885 aaKnown RBP17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 ANKLE1Q8NAG6 615 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 NRBP1Q9UHY1 535 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 PNMA2Q9UL42 364 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
CCNDBP1-203ENST00000562553 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 CCDC69A6NI79 296 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 MSCO60682 206 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 KRT32Q14532 448 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 LENG1Q96BZ8 264 aaPredicted RBP17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 ZHX1Q9UKY1 873 aaPredicted RBP17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 NR2E3Q9Y5X4 410 aa17.89■□□□□ 0.45
CCNDBP1-203ENST00000562553 ZBTB5O15062 677 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 CALML3P27482 149 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 RNF207Q6ZRF8 634 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 SGMS1Q86VZ5 419 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 HOMER1Q86YM7 354 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 TMTC2Q8N394 836 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 TBC1D5Q92609 795 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 JAKMIP1Q96N16 626 aaKnown RBP17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 PIGSQ96S52 555 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 KATNBL1Q9H079 304 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 ABCB11O95342 1321 aa17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 RANBP2P49792 3224 aaKnown RBP17.88■□□□□ 0.45
CCNDBP1-203ENST00000562553 TRIOBPQ9H2D6 2365 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 PLEKHA8P1O95397 391 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 ACVR2BQ13705 512 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 AMNQ9BXJ7 453 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 PRO3102Q9H379 93 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 SLC12A7Q9Y666 1083 aa17.87■□□□□ 0.45
CCNDBP1-203ENST00000562553 ASB14A6NK59 587 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 OPLAHO14841 1288 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 ADCY6O43306 1168 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 AKR1A1P14550 325 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 ALDH5A1P51649 535 aaPredicted RBP17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 GJC2Q5T442 439 aaPredicted RBP17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 MICU3Q86XE3 530 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 ABHD16BQ9H3Z7 469 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 C11orf49Q9H6J7 331 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
CCNDBP1-203ENST00000562553 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms