RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MUM1L1Q5H9M0 696 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
CDH1-204ENST00000562118 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
CDH1-204ENST00000562118 FAM133AQ8N9E0 248 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 NPLOC4Q8TAT6 608 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 TRIB2Q92519 343 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 ZNF333Q96JL9 665 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 TRERF1Q96PN7 1200 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 MMP19Q99542 508 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 A1CFQ9NQ94 594 aaKnown RBP15.59■□□□□ 0.09
CDH1-204ENST00000562118 IVNS1ABPQ9Y6Y0 642 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 PFASO15067 1338 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 GOLGA8AA7E2F4 631 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 GOLGA8BA8MQT2 603 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 ADCY3O60266 1144 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 TAL1P17542 331 aaPredicted RBP15.58■□□□□ 0.08
CDH1-204ENST00000562118 GRK4P32298 578 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 METAP2P50579 478 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDH1-204ENST00000562118 AK2P54819 239 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 ANKRD1Q15327 319 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 MAMDC4Q6UXC1 1216 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 SYNE3Q6ZMZ3 975 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 MSL3Q8N5Y2 521 aaKnown RBP15.58■□□□□ 0.08
CDH1-204ENST00000562118 SAMD3Q8N6K7 520 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 PIGSQ96S52 555 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 AMNQ9BXJ7 453 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 CYP39A1Q9NYL5 469 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 ISY1Q9ULR0 285 aaKnown RBP15.58■□□□□ 0.08
CDH1-204ENST00000562118 CTDP1Q9Y5B0 961 aaPredicted RBP15.58■□□□□ 0.08
CDH1-204ENST00000562118 ASTN1O14525 1302 aa15.58■□□□□ 0.08
CDH1-204ENST00000562118 LOC102724159A0A0B4J2E5 919 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 CCDC196A0A1B0GTZ2 297 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 NFIBO00712 420 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 HMGCRP04035 888 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 ALAS1P13196 640 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 KCTD2Q14681 263 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 PWP2Q15269 919 aaKnown RBP15.57■□□□□ 0.08
CDH1-204ENST00000562118 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 CCAR1Q8IX12 1150 aaKnown RBP15.57■□□□□ 0.08
CDH1-204ENST00000562118 RAET1EQ8TD07 263 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 MORC4Q8TE76 937 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 MAML3Q96JK9 1138 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 FLRT1Q9NZU1 646 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 TPCN1Q9ULQ1 816 aa15.57■□□□□ 0.08
CDH1-204ENST00000562118 PFKFB2O60825 505 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 IFNAR1P17181 557 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 ADD1P35611 737 aaKnown RBP15.56■□□□□ 0.08
CDH1-204ENST00000562118 HSD17B4P51659 736 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 FGD1P98174 961 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 TRAF1Q13077 416 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 CCL14Q16627 93 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 RAB11FIP4Q86YS3 637 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 ABHD8Q96I13 439 aa15.56■□□□□ 0.08
CDH1-204ENST00000562118 MAP3K20Q9NYL2 800 aaKnown RBP15.56■□□□□ 0.08
CDH1-204ENST00000562118 SYNGAP1Q96PV0 1343 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 hCG_1984214I3L0E3 225 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 CYP2B6P20813 491 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 NEK4P51957 841 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 RABEP1Q15276 862 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 SLC9C1Q4G0N8 1177 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 WDR78Q5VTH9 848 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 TNS4Q8IZW8 715 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 ZNF713Q8N859 430 aaPredicted RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 RRP36Q96EU6 259 aaKnown RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 SLC5A4Q9NY91 659 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 NRBP1Q9UHY1 535 aa15.55■□□□□ 0.08
CDH1-204ENST00000562118 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
CDH1-204ENST00000562118 FRMPD4Q14CM0 1322 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 INHAP05111 366 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 PGK2P07205 417 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 ELNP15502 786 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 EDNRBP24530 442 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 SCRN1Q12765 414 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 PKN1Q16512 942 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 ANKRD35Q8N283 1001 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 RNF26Q9BY78 433 aaPredicted RBP15.54■□□□□ 0.08
CDH1-204ENST00000562118 KATNBL1Q9H079 304 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 VAT1LQ9HCJ6 419 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 PAK6Q9NQU5 681 aaPredicted RBP15.54■□□□□ 0.08
CDH1-204ENST00000562118 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 KIAA1217Q5T5P2 1943 aa15.54■□□□□ 0.08
CDH1-204ENST00000562118 MKI67P46013 3256 aaKnown RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 PIK3CDO00329 1044 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 PRPF3O43395 683 aaKnown RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 CYBAP13498 195 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 RPS6P62753 249 aaKnown RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 ST3GAL1Q11201 340 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 ME3Q16798 604 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 PFKFB3Q16875 520 aaPredicted RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 USH1GQ495M9 461 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 PPP1R18Q6NYC8 613 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms