RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 RXRAP19793 462 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 QRICH1Q2TAL8 776 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 MUM1L1Q5H9M0 696 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 OLFML2BQ68BL8 750 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 TMTC3Q6ZXV5 915 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 RUFY3Q7L099 469 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 NPLOC4Q8TAT6 608 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 BRF1Q92994 677 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 MAML3Q96JK9 1138 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 FGD4Q96M96 766 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 UPF3BQ9BZI7 483 aaKnown RBP8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 FLRT1Q9NZU1 646 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 ABCB11O95342 1321 aa8.28□□□□□ -1.08
TUBGCP4-203ENST00000562053 ZBTB5O15062 677 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 ZBTB43O43298 467 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 PLEKHA8P1O95397 391 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 PGK2P07205 417 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 CYBAP13498 195 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 GNAQP50148 359 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 EVCP57679 992 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 UBXN2AP68543 259 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 TRIM32Q13049 653 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 MTFR1Q15390 333 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 RTN1Q16799 776 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 ZNF792Q3KQV3 632 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 USH1GQ495M9 461 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 SLC30A10Q6XR72 485 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 Q6ZUG5 572 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 ZNF467Q7Z7K2 595 aaPredicted RBP8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 DPP9Q86TI2 863 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 HOMER1Q86YM7 354 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 RAB11FIP4Q86YS3 637 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 FAM133AQ8N9E0 248 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 CLEC4DQ8WXI8 215 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 SLC5A4Q9NY91 659 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 CYP39A1Q9NYL5 469 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 DIS3Q9Y2L1 958 aaKnown RBP8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 CYP46A1Q9Y6A2 500 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 ASTN1O14525 1302 aa8.27□□□□□ -1.09
TUBGCP4-203ENST00000562053 CCDC85CA6NKD9 419 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 GOLGA8AA7E2F4 631 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 OPLAHO14841 1288 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 CCL5P13501 91 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SMARCA1P28370 1054 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 METAP2P50579 478 aaKnown RBP eCLIP8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SOX10P56693 466 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 FGD1P98174 961 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 GHRHRQ02643 423 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 NSMFQ6X4W1 530 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 ANKRD35Q8N283 1001 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 MSL3Q8N5Y2 521 aaKnown RBP8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 DDX11Q96FC9 970 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 PIGSQ96S52 555 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 AMNQ9BXJ7 453 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 MAF1Q9H063 256 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 KIAA1217Q5T5P2 1943 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 RPTORQ8N122 1335 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 SYNGAP1Q96PV0 1343 aa8.26□□□□□ -1.09
TUBGCP4-203ENST00000562053 MKI67P46013 3256 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 CDC27P30260 824 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 CYP2C19P33261 490 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 CNTN2Q02246 1040 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 CACNB2Q08289 660 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 FUT2Q10981 343 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 PPP2R5BQ15173 497 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 MFSD14CQ5VZR4 134 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 MAMDC4Q6UXC1 1216 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 SRBD1Q8N5C6 995 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 RRP36Q96EU6 259 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 TINF2Q9BSI4 451 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 FAM217BQ9NTX9 383 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 BIN2Q9UBW5 565 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 SEC63Q9UGP8 760 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 NRBP1Q9UHY1 535 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 ALPK3Q96L96 1907 aa8.25□□□□□ -1.09
TUBGCP4-203ENST00000562053 PDE4DIPQ5VU43 2346 aa8.24□□□□□ -1.09
TUBGCP4-203ENST00000562053 LOC102724159A0A0B4J2E5 919 aa8.24□□□□□ -1.09
TUBGCP4-203ENST00000562053 PTPDC1A2A3K4 754 aa8.24□□□□□ -1.09
TUBGCP4-203ENST00000562053 POTEFA5A3E0 1075 aa8.24□□□□□ -1.09
TUBGCP4-203ENST00000562053 SOWAHBA6NEL2 793 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms