RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MUM1L1Q5H9M0 696 aa29.79■■■□□ 2.36
NME3-202ENST00000561637 A1CFQ9NQ94 594 aaKnown RBP29.79■■■□□ 2.36
NME3-202ENST00000561637 NRBP1Q9UHY1 535 aa29.79■■■□□ 2.36
NME3-202ENST00000561637 FPGSQ05932 587 aa29.78■■■□□ 2.36
NME3-202ENST00000561637 RNF180Q86T96 592 aa29.78■■■□□ 2.36
NME3-202ENST00000561637 ACAD9Q9H845 621 aa29.78■■■□□ 2.36
NME3-202ENST00000561637 TMEM39AQ9NV64 488 aa29.78■■■□□ 2.36
NME3-202ENST00000561637 ZHX1Q9UKY1 873 aaPredicted RBP29.78■■■□□ 2.36
NME3-202ENST00000561637 ZNF213O14771 459 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 ADCY6O43306 1168 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 IRX5P78411 483 aaPredicted RBP29.77■■■□□ 2.36
NME3-202ENST00000561637 FAAP100Q0VG06 881 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 TJAP1Q5JTD0 557 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 MAMDC4Q6UXC1 1216 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 FBXO40Q9UH90 709 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 CNPY2Q9Y2B0 182 aa29.77■■■□□ 2.36
NME3-202ENST00000561637 ASTN1O14525 1302 aa29.76■■■□□ 2.36
NME3-202ENST00000561637 SYNGAP1Q96PV0 1343 aa29.76■■■□□ 2.36
NME3-202ENST00000561637 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.76■■■□□ 2.35
NME3-202ENST00000561637 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.76■■■□□ 2.35
NME3-202ENST00000561637 HIP1O00291 1037 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 FDX1P10109 184 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 PDHBP11177 359 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 TRERF1Q96PN7 1200 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 PURBQ96QR8 312 aaKnown RBP29.76■■■□□ 2.35
NME3-202ENST00000561637 DSCC1Q9BVC3 393 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 ZNF576Q9H609 170 aa29.76■■■□□ 2.35
NME3-202ENST00000561637 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.76■■■□□ 2.35
NME3-202ENST00000561637 SOWAHBA6NEL2 793 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 B4E1Z4 1266 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 KDM4AO75164 1064 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 ADAMTS4O75173 837 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 SYDE2Q5VT97 1194 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 FAM133AQ8N9E0 248 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 RANBP17Q9H2T7 1088 aaKnown RBP29.75■■■□□ 2.35
NME3-202ENST00000561637 CPVLQ9H3G5 476 aa29.75■■■□□ 2.35
NME3-202ENST00000561637 RNF41Q9H4P4 317 aaPredicted RBP29.75■■■□□ 2.35
NME3-202ENST00000561637 AKR1A1P14550 325 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 COL9A1P20849 921 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 BTNL9Q6UXG8 535 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 ARMCX2Q7L311 632 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 ZNF467Q7Z7K2 595 aaPredicted RBP29.74■■■□□ 2.35
NME3-202ENST00000561637 ESR2Q92731 530 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 CCPG1Q9ULG6 757 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 LCTP09848 1927 aa29.74■■■□□ 2.35
NME3-202ENST00000561637 MYADML2A6NDP7 307 aa29.73■■■□□ 2.35
NME3-202ENST00000561637 TNFRSF10AO00220 468 aa29.73■■■□□ 2.35
NME3-202ENST00000561637 PCP11498 1178 aaKnown RBP29.73■■■□□ 2.35
NME3-202ENST00000561637 ANKRD33Q7Z3H0 272 aa29.73■■■□□ 2.35
NME3-202ENST00000561637 MSL3Q8N5Y2 521 aaKnown RBP29.73■■■□□ 2.35
NME3-202ENST00000561637 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.73■■■□□ 2.358e-10■□□□□ 9.4
NME3-202ENST00000561637 KATNBL1Q9H079 304 aa29.73■■■□□ 2.35
NME3-202ENST00000561637 GOLGA8HP0CJ92 632 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 PTGS1P23219 599 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 ZNF543Q08ER8 600 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 ACVR2BQ13705 512 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 CCDC144CPQ8IYA2 1237 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 TOX2Q96NM4 488 aa29.72■■■□□ 2.35
NME3-202ENST00000561637 SYNRGQ9UMZ2 1314 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 SNHG28P0DPA3 235 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 ACLYP53396 1101 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 TKFCQ3LXA3 575 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 TIFAQ96CG3 184 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 STARD7Q9NQZ5 370 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 RAPGEFL1Q9UHV5 662 aa29.71■■■□□ 2.35
NME3-202ENST00000561637 CHD9Q3L8U1 2897 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 GRXCR1A8MXD5 290 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 ICAM1P05362 532 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 CHMLP26374 656 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 PBX2P40425 430 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 PTH1RQ03431 593 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 NSMFQ6X4W1 530 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 C16orf59Q7L2K0 433 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 SKAP1Q86WV1 359 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 TTC14Q96N46 770 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 TSEN34Q9BSV6 310 aaKnown RBP29.7■■■□□ 2.35
NME3-202ENST00000561637 CYP39A1Q9NYL5 469 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 FAM184BQ9ULE4 1060 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 TAF6LQ9Y6J9 622 aa29.7■■■□□ 2.35
NME3-202ENST00000561637 GBF1Q92538 1859 aa29.7■■■□□ 2.34
NME3-202ENST00000561637 DCDC2CA8MYV0 355 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 NFIBO00712 420 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 TIMP1P01033 207 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 IMMTQ16891 758 aaKnown RBP29.69■■■□□ 2.34
NME3-202ENST00000561637 CCDC144BQ3MJ40 725 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 KLHDC9Q8NEP7 349 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 PPM1EQ8WY54 764 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 ZSWIM5Q9P217 1185 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 TBX21Q9UL17 535 aa29.69■■■□□ 2.34
NME3-202ENST00000561637 LRRC37A2A6NM11 1700 aa29.68■■■□□ 2.34
NME3-202ENST00000561637 CCSAPQ6IQ19 270 aaPredicted RBP29.68■■■□□ 2.34
NME3-202ENST00000561637 ENAHQ8N8S7 591 aaPredicted RBP29.68■■■□□ 2.34
NME3-202ENST00000561637 UBA5Q9GZZ9 404 aa29.68■■■□□ 2.34
NME3-202ENST00000561637 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.67■■■□□ 2.34
NME3-202ENST00000561637 KCNA10Q16322 511 aa29.67■■■□□ 2.34
NME3-202ENST00000561637 PBX4Q9BYU1 374 aa29.67■■■□□ 2.34
NME3-202ENST00000561637 TMEM240Q5SV17 173 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 TMEM63BQ5T3F8 832 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 MFSD5Q6N075 450 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 DGKHQ86XP1 1220 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms