RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
CDC42BPB-208ENST00000561271 KRT23Q9C075 422 aa20.18■□□□□ 0.82
CDC42BPB-208ENST00000561271 KATNBL1Q9H079 304 aa20.18■□□□□ 0.82
CDC42BPB-208ENST00000561271 ZSWIM5Q9P217 1185 aa20.18■□□□□ 0.82
CDC42BPB-208ENST00000561271 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 MYADML2A6NDP7 307 aa20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 NFIBO00712 420 aa20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 MDM2Q00987 491 aaPredicted RBP20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 PURBQ96QR8 312 aaKnown RBP20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
CDC42BPB-208ENST00000561271 A0A1W2PQ45 241 aaPredicted RBP20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 A0A1W2PQY0 241 aa20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 BMP8BP34820 402 aa20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 IRX5P78411 483 aaPredicted RBP20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 CCDC178Q5BJE1 867 aa20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 GPATCH4Q5T3I0 446 aaKnown RBP20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 UBAC1Q9BSL1 405 aa20.16■□□□□ 0.82
CDC42BPB-208ENST00000561271 SOX1O00570 391 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 SGSM2O43147 1006 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 DUSP11O75319 330 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 CYB5R4Q7L1T6 521 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 ANKS1AQ92625 1134 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 UBE2OQ9C0C9 1292 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 UBA5Q9GZZ9 404 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 PRDM5Q9NQX1 630 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 WDR19Q8NEZ3 1342 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 DOCK5Q9H7D0 1870 aa20.15■□□□□ 0.82
CDC42BPB-208ENST00000561271 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 ASB14A6NK59 587 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 CYP21A2P08686 494 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 C6orf222P0C671 652 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 BAATQ14032 418 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 USH1GQ495M9 461 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 FBXO16Q8IX29 292 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 KLHDC9Q8NEP7 349 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 TAF6LQ9Y6J9 622 aa20.14■□□□□ 0.81
CDC42BPB-208ENST00000561271 ACLYP53396 1101 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 CDC37Q16543 378 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 ASPRV1Q53RT3 343 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 IFIT1BQ5T764 474 aaKnown RBP20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 EEPD1Q7L9B9 569 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 PDLIM7Q9NR12 457 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 PRKAG2Q9UGJ0 569 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 GBF1Q92538 1859 aa20.13■□□□□ 0.81
CDC42BPB-208ENST00000561271 SCN10AQ9Y5Y9 1956 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 PTGS1P23219 599 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 CALML3P27482 149 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 CST5P28325 142 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 ALDH5A1P51649 535 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 SEC23AQ15436 765 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 KCNA10Q16322 511 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 TDHQ8IZJ6 230 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 LRCH3Q96II8 777 aa20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 LBHD1Q9BQE6 289 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-208ENST00000561271 LAMA2P24043 3122 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 PQBP1O60828 265 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 PARP1P09874 1014 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 TNFAIP2Q03169 654 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 TLE2Q04725 743 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 TRDNQ13061 729 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 C1orf53Q5VUE5 145 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 CCSAPQ6IQ19 270 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 RNF207Q6ZRF8 634 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 STOX1Q6ZVD7 989 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 SH3RF1Q7Z6J0 888 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 STARD7Q9NQZ5 370 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 PDGFCQ9NRA1 345 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 PNMA2Q9UL42 364 aa20.11■□□□□ 0.81
CDC42BPB-208ENST00000561271 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 DHX16O60231 1041 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 GJA9P57773 515 aa20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 RPS6P62753 249 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 TLK2Q86UE8 772 aa20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 ADGRF4Q8IZF3 695 aa20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 ADD3Q9UEY8 706 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-208ENST00000561271 TRIP12Q14669 1992 aaPredicted RBP20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 E7EWF7 191 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 CTAGE5O15320 804 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 ASGR1P07306 291 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 SMPD1P17405 629 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 BEX3Q00994 111 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 TMEM63BQ5T3F8 832 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 RALYLQ86SE5 291 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 STAG2Q8N3U4 1231 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 PCSK9Q8NBP7 692 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 VTA1Q9NP79 307 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 TANC1Q9C0D5 1861 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms