RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RXRAP19793 462 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 ADORA2AP29274 412 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 RGS2P41220 211 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 AK2P54819 239 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 KCTD2Q14681 263 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 NTRK3Q16288 839 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 CCDC174Q6PII3 467 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 FBXO11Q86XK2 927 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 CLEC4DQ8WXI8 215 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 PIGSQ96S52 555 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 MMP19Q99542 508 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 VAT1LQ9HCJ6 419 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 RNF146Q9NTX7 359 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 MAP3K20Q9NYL2 800 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 PFASO15067 1338 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 GOLGA8AA7E2F4 631 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 GOLGA8BA8MQT2 603 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 ADCY3O60266 1144 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 PPP1R11O60927 126 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 COBLO75128 1261 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 GRK4P32298 578 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 RABEP1Q15276 862 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 ZNF792Q3KQV3 632 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 CCDC144CPQ8IYA2 1237 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 APBA2Q99767 749 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 SLC5A4Q9NY91 659 aa11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 MRPL11Q9Y3B7 192 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-221ENST00000561055 MYH7BA7E2Y1 1941 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 LOC102724159A0A0B4J2E5 919 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 PFKFB2O60825 505 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 IFNAR1P17181 557 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 CYP2B6P20813 491 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 PWP2Q15269 919 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 MAMDC4Q6UXC1 1216 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 DPP9Q86TI2 863 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 RAB11FIP4Q86YS3 637 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 TEX2Q8IWB9 1127 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 FAM133AQ8N9E0 248 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 NPLOC4Q8TAT6 608 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.62
RABGGTA-221ENST00000561055 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 NFIBO00712 420 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 OPLAHO14841 1288 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 SLC9C1Q4G0N8 1177 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 MAP3K21Q5TCX8 1036 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 HOMER1Q86YM7 354 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 MCF2L2Q86YR7 1114 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 TRIB2Q92519 343 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 RNF26Q9BY78 433 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 PCDHA1Q9Y5I3 950 aa11.14□□□□□ -0.63
RABGGTA-221ENST00000561055 HMGCRP04035 888 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 PGK2P07205 417 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 HSD17B4P51659 736 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 ME3Q16798 604 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 USH1GQ495M9 461 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 RNF207Q6ZRF8 634 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 DNERQ8NFT8 737 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 ZNF333Q96JL9 665 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 FGD4Q96M96 766 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 NAP1L2Q9ULW6 460 aaPredicted RBP11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
RABGGTA-221ENST00000561055 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms