RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HMX1Q9NP08 348 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 TMOD4Q9NZQ9 345 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 FLRT1Q9NZU1 646 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 SERPINB13Q9UIV8 391 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 EXOC6BQ9Y2D4 811 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 ZNF236Q9UL36 1845 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 A0A1W2PRG0 241 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 TCRBV5S4A2TA0A5A2 114 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 SMIM22K7EJ46 135 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 SYN1P17600 705 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 VCAM1P19320 739 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 MAPK4P31152 587 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 ZYXQ15942 572 aaKnown RBP7.06□□□□□ -1.28
USP3-215ENST00000559771 SLFNL1Q499Z3 407 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 KIAA1755Q5JYT7 1200 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 USP17L2Q6R6M4 530 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 LBX2Q6XYB7 198 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 CATSPERGQ6ZRH7 1159 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 SIAH1Q8IUQ4 282 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 ITPRIPQ8IWB1 547 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 C7orf61Q8IZ16 206 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 INSM2Q96T92 566 aaPredicted RBP7.06□□□□□ -1.28
USP3-215ENST00000559771 KIAA1683Q9H0B3 1180 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 ZMYND8Q9ULU4 1186 aaPredicted RBP7.06□□□□□ -1.28
USP3-215ENST00000559771 RABGAP1Q9Y3P9 1069 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 GTF3C3Q9Y5Q9 886 aa7.06□□□□□ -1.28
USP3-215ENST00000559771 CHGBP05060 677 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 HLA-DOAP06340 250 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 CYP2D6P10635 497 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 PDE6AP16499 860 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 USP5P45974 858 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 HNRNPUQ00839 825 aaKnown RBP eCLIP7.05□□□□□ -1.28
USP3-215ENST00000559771 SEPT2Q15019 361 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 LRRC26Q2I0M4 334 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 ABCB5Q2M3G0 1257 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 PLEKHH3Q7Z736 793 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 AACSQ86V21 672 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 TRPV1Q8NER1 839 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 NPLOC4Q8TAT6 608 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 RHPN1Q8TCX5 695 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 SOCS4Q8WXH5 440 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 EDC3Q96F86 508 aaKnown RBP7.05□□□□□ -1.28
USP3-215ENST00000559771 APBA2Q99767 749 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 PAGR1Q9BTK6 254 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 C1QTNF2Q9BXJ5 285 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 C11orf49Q9H6J7 331 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 IL1RAPL2Q9NP60 686 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 MKL2Q9ULH7 1088 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
USP3-215ENST00000559771 BAZ2AQ9UIF9 1905 aaKnown RBP7.05□□□□□ -1.28
USP3-215ENST00000559771 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 MYH8P13535 1937 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 HOXC6P09630 235 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 RGS2P41220 211 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 MAGEA10P43363 369 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 GRB14Q14449 540 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 RAB3GAP1Q15042 981 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 CERKLQ49MI3 558 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 FTSJ3Q8IY81 847 aaKnown RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 LCORLQ8N3X6 602 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 SLC44A5Q8NCS7 719 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 AGBL1Q96MI9 1066 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 TRIM34Q9BYJ4 488 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
USP3-215ENST00000559771 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 UNC80Q8N2C7 3258 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
USP3-215ENST00000559771 ZNF532Q9HCE3 1301 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 MYH7P12883 1935 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 GREB1LQ9C091 1923 aaPredicted RBP7.03□□□□□ -1.28
USP3-215ENST00000559771 MAGEB6P1A0A0J9YX57 407 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 SLC15A5A6NIM6 579 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 PRKAB2O43741 272 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 USP14P54578 494 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 MAP3K12Q12852 859 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 PDE3AQ14432 1141 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 DBN1Q16643 649 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 RSPO4Q2I0M5 234 aaPredicted RBP7.03□□□□□ -1.28
USP3-215ENST00000559771 LRIT3Q3SXY7 679 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 Q7L0L9 218 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms