RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNX1-205ENST00000559339 CHST3Q7LGC8 479 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 RNF180Q86T96 592 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 ADGRF4Q8IZF3 695 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CTCFLQ8NI51 663 aaPredicted RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 NUP133Q8WUM0 1156 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 SPOCK2Q92563 424 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 SHISA4Q96DD7 197 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 PAWRQ96IZ0 340 aaKnown RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 NEK1Q96PY6 1258 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 AMNQ9BXJ7 453 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 UBA5Q9GZZ9 404 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 MAF1Q9H063 256 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 C11orf49Q9H6J7 331 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 VAT1LQ9HCJ6 419 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 A1CFQ9NQ94 594 aaKnown RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 RTN4Q9NQC3 1192 aaKnown RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 CYP39A1Q9NYL5 469 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 ZHX1Q9UKY1 873 aaPredicted RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 FAM184BQ9ULE4 1060 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 MRPL11Q9Y3B7 192 aaKnown RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 SLC12A7Q9Y666 1083 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 ABCB11O95342 1321 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 GREB1LQ9C091 1923 aaPredicted RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 LOC102724159A0A0B4J2E5 919 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 ZBTB5O15062 677 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 EPB41L2O43491 1005 aaKnown RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 PRC1O43663 620 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 DDAH1O94760 285 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 CALML3P27482 149 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 PSMA5P28066 241 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 LIFRP42702 1097 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 CNTN2Q02246 1040 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 ACVR2BQ13705 512 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 BAATQ14032 418 aaPredicted RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 PWP2Q15269 919 aaKnown RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 SEC23AQ15436 765 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 MUM1L1Q5H9M0 696 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 PRAMEF19Q5SWL8 479 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 ARMCX2Q7L311 632 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 DHX32Q7L7V1 743 aaKnown RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 RASGRP2Q7LDG7 609 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 UBE2Q1Q7Z7E8 422 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 SKAP1Q86WV1 359 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 FBXO11Q86XK2 927 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 CCDC144CPQ8IYA2 1237 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 MB21D2Q8IYB1 491 aaPredicted RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 FAM133AQ8N9E0 248 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 RGS22Q8NE09 1264 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 DNERQ8NFT8 737 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 IGDCC4Q8TDY8 1250 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 MAP3K14Q99558 947 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 LZTS2Q9BRK4 669 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 SENP6Q9GZR1 1112 aaPredicted RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 XPNPEP3Q9NQH7 507 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 MAP3K20Q9NYL2 800 aaKnown RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 PRKAG2Q9UGJ0 569 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 SEC63Q9UGP8 760 aaKnown RBP5.08□□□□□ -1.6
SNX1-205ENST00000559339 MAD2L2Q9UI95 211 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 PCDHA1Q9Y5I3 950 aa5.08□□□□□ -1.6
SNX1-205ENST00000559339 MGAMO43451 1857 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PDE4DIPQ5VU43 2346 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 ZSWIM8A7E2V4 1837 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PNMA6FA0A0J9YX94 578 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 CCDC196A0A1B0GTZ2 297 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PALM3A6NDB9 673 aaPredicted RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 NFIBO00712 420 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 ZEB2O60315 1214 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 DUSP11O75319 330 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 SNAI1O95863 264 aaPredicted RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 IGHA2P01877 340 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 SMARCA1P28370 1054 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 RPS6P62753 249 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 TNFAIP2Q03169 654 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PDE4DQ08499 809 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 TROAPQ12815 778 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 GRM4Q14833 912 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PPP2R5BQ15173 497 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 QRICH1Q2TAL8 776 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 CCDC144BQ3MJ40 725 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 TSGA10IPQ3SY00 556 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 BRDTQ58F21 947 aaPredicted RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 GJC2Q5T442 439 aaPredicted RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 ANO1Q5XXA6 986 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 STOX1Q6ZVD7 989 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 EEPD1Q7L9B9 569 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 HOMER1Q86YM7 354 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 ZNF654Q8IZM8 581 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 STAG2Q8N3U4 1231 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 SAMD3Q8N6K7 520 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 PCSK9Q8NBP7 692 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 TRPV1Q8NER1 839 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 NSUN6Q8TEA1 469 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 RRP36Q96EU6 259 aaKnown RBP5.07□□□□□ -1.6
SNX1-205ENST00000559339 AP5M1Q9H0R1 490 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 JMJD4Q9H9V9 463 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms