RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ADD3Q9UEY8 706 aaKnown RBP20.83■□□□□ 0.93
TPM1-218ENST00000559281 B4E1Z4 1266 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 C6orf222P0C671 652 aaPredicted RBP20.82■□□□□ 0.92
TPM1-218ENST00000559281 CST5P28325 142 aaPredicted RBP20.82■□□□□ 0.92
TPM1-218ENST00000559281 TLE2Q04725 743 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 GPR153Q6NV75 609 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 NOL8Q76FK4 1167 aaKnown RBP20.82■□□□□ 0.92
TPM1-218ENST00000559281 ANKS1AQ92625 1134 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 GLT1D1Q96MS3 346 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
TPM1-218ENST00000559281 ZSWIM5Q9P217 1185 aa20.82■□□□□ 0.92
TPM1-218ENST00000559281 RAD50Q92878 1312 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 GSPT1P15170 499 aaKnown RBP20.81■□□□□ 0.92
TPM1-218ENST00000559281 GJA9P57773 515 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 TNFAIP2Q03169 654 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 PNMA1Q8ND90 353 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 UBAC1Q9BSL1 405 aa20.81■□□□□ 0.92
TPM1-218ENST00000559281 LOC102724159A0A0B4J2E5 919 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 SOX1O00570 391 aaPredicted RBP20.8■□□□□ 0.92
TPM1-218ENST00000559281 TRDNQ13061 729 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
TPM1-218ENST00000559281 PWP2Q15269 919 aaKnown RBP20.8■□□□□ 0.92
TPM1-218ENST00000559281 IQSEC1Q6DN90 963 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
TPM1-218ENST00000559281 VTI1AQ96AJ9 217 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 LRCH3Q96II8 777 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 TOX2Q96NM4 488 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
TPM1-218ENST00000559281 UPF3AQ9H1J1 476 aaKnown RBP20.8■□□□□ 0.92
TPM1-218ENST00000559281 ELP1O95163 1332 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 PTPDC1A2A3K4 754 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 DCDC2CA8MYV0 355 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 CLTBP09497 229 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
TPM1-218ENST00000559281 AP5M1Q9H0R1 490 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 PDLIM7Q9NR12 457 aa20.79■□□□□ 0.92
TPM1-218ENST00000559281 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 FRMPD3Q5JV73 1810 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
TPM1-218ENST00000559281 ASGR1P07306 291 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 RNF207Q6ZRF8 634 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 ANKRD33Q7Z3H0 272 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
TPM1-218ENST00000559281 VTA1Q9NP79 307 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
TPM1-218ENST00000559281 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 TNKSO95271 1327 aa20.78■□□□□ 0.92
TPM1-218ENST00000559281 B4DLN1 442 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 NFIBO00712 420 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 ZEB2O60315 1214 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 CHMLP26374 656 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 MRPL12P52815 198 aaKnown RBP20.77■□□□□ 0.92
TPM1-218ENST00000559281 NKX3-2P78367 333 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 MORC4Q8TE76 937 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 BADQ92934 168 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 MAF1Q9H063 256 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 Q9Y3F1 56 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 PLXNA1Q9UIW2 1896 aa20.77■□□□□ 0.92
TPM1-218ENST00000559281 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
TPM1-218ENST00000559281 TRIM43BA6NCK2 446 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 MYADML2A6NDP7 307 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 ADCY6O43306 1168 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 PARP1P09874 1014 aaKnown RBP20.76■□□□□ 0.91
TPM1-218ENST00000559281 RAG1P15918 1043 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 CALML3P27482 149 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 IFIT1BQ5T764 474 aaKnown RBP20.76■□□□□ 0.91
TPM1-218ENST00000559281 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 CLEC4DQ8WXI8 215 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 TRIM43Q96BQ3 446 aaPredicted RBP20.76■□□□□ 0.91
TPM1-218ENST00000559281 IL25Q9H293 177 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 GNEQ9Y223 722 aaKnown RBP20.76■□□□□ 0.91
TPM1-218ENST00000559281 ASTN1O14525 1302 aa20.76■□□□□ 0.91
TPM1-218ENST00000559281 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
TPM1-218ENST00000559281 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.75■□□□□ 0.91
TPM1-218ENST00000559281 KIAA0355O15063 1070 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 DYNC1LI2O43237 492 aaPredicted RBP20.75■□□□□ 0.91
TPM1-218ENST00000559281 CABYRO75952 493 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 ALDH5A1P51649 535 aaPredicted RBP20.75■□□□□ 0.91
TPM1-218ENST00000559281 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 TLK2Q86UE8 772 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 DNERQ8NFT8 737 aa20.75■□□□□ 0.91
TPM1-218ENST00000559281 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
TPM1-218ENST00000559281 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
TPM1-218ENST00000559281 SMPD1P17405 629 aa20.74■□□□□ 0.91
TPM1-218ENST00000559281 RPS6P62753 249 aaKnown RBP20.74■□□□□ 0.91
TPM1-218ENST00000559281 FSCN1Q16658 493 aaKnown RBP20.74■□□□□ 0.91
TPM1-218ENST00000559281 USH1GQ495M9 461 aa20.74■□□□□ 0.91
TPM1-218ENST00000559281 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
TPM1-218ENST00000559281 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
TPM1-218ENST00000559281 PDGFCQ9NRA1 345 aa20.74■□□□□ 0.91
TPM1-218ENST00000559281 ERICH2A1L162 156 aa20.73■□□□□ 0.91
TPM1-218ENST00000559281 ARVCFO00192 962 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms