RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 SLC30A10Q6XR72 485 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 ARMCX2Q7L311 632 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
PBX1-213ENST00000558796 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 PURBQ96QR8 312 aaKnown RBP12.84□□□□□ -0.35
PBX1-213ENST00000558796 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 C11orf49Q9H6J7 331 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
PBX1-213ENST00000558796 ASTN1O14525 1302 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
PBX1-213ENST00000558796 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
PBX1-213ENST00000558796 CAPN2P17655 700 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
PBX1-213ENST00000558796 MAMDC4Q6UXC1 1216 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
PBX1-213ENST00000558796 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 DPF3Q92784 378 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 JMJD4Q9H9V9 463 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.36
PBX1-213ENST00000558796 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
PBX1-213ENST00000558796 CALML3P27482 149 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 TROAPQ12815 778 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 BAATQ14032 418 aaPredicted RBP12.82□□□□□ -0.36
PBX1-213ENST00000558796 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 ADCK5Q3MIX3 580 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
PBX1-213ENST00000558796 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 TCEANC2Q96MN5 208 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 DOCK5Q9H7D0 1870 aa12.82□□□□□ -0.36
PBX1-213ENST00000558796 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 LTBP2Q14767 1821 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 DDAH1O94760 285 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 RARBP10826 455 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 AKR1A1P14550 325 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 RXRAP19793 462 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 ACVR2BQ13705 512 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 XPNPEP3Q9NQH7 507 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 ABCB11O95342 1321 aa12.81□□□□□ -0.36
PBX1-213ENST00000558796 RANBP2P49792 3224 aaKnown RBP12.81□□□□□ -0.36
PBX1-213ENST00000558796 ASB14A6NK59 587 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 H0YGN5 161 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 DNM1LO00429 736 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 ADCY6O43306 1168 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
PBX1-213ENST00000558796 REC8O95072 547 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 PGK1P00558 417 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 COL6A1P12109 1028 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
PBX1-213ENST00000558796 RPS6P62753 249 aaKnown RBP12.8□□□□□ -0.36
PBX1-213ENST00000558796 CCDC144BQ3MJ40 725 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 EEPD1Q7L9B9 569 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 FBXO16Q8IX29 292 aaPredicted RBP12.8□□□□□ -0.36
PBX1-213ENST00000558796 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
PBX1-213ENST00000558796 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 PIGSQ96S52 555 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
PBX1-213ENST00000558796 ZBTB5O15062 677 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 CYTH3O43739 400 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 EVI5O60447 810 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 CPA1P15085 419 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 HSPA4P34932 840 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 KRT32Q14532 448 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 LRRC41Q15345 812 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 MICU3Q86XE3 530 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 MTMR8Q96EF0 704 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 JAKMIP1Q96N16 626 aaKnown RBP12.79□□□□□ -0.36
PBX1-213ENST00000558796 AMNQ9BXJ7 453 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
PBX1-213ENST00000558796 FAM184BQ9ULE4 1060 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 SNX14Q9Y5W7 946 aa12.79□□□□□ -0.36
PBX1-213ENST00000558796 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms