RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RANBP2P49792 3224 aaKnown RBP9.54□□□□□ -0.88
TRAF3-205ENST00000558700 SOX1O00570 391 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-205ENST00000558700 FOXP2O15409 715 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 C7P10643 843 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 SLC4A3P48751 1232 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 LRRC41Q15345 812 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 PRAMEF19Q5SWL8 479 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 PADI6Q6TGC4 694 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 RNF180Q86T96 592 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 ANKRD35Q8N283 1001 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 CHST13Q8NET6 341 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-205ENST00000558700 RAVER2Q9HCJ3 691 aaKnown RBP9.53□□□□□ -0.88
TRAF3-205ENST00000558700 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-205ENST00000558700 ATP11BQ9Y2G3 1177 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 CCDC171Q6TFL3 1326 aa9.53□□□□□ -0.88
TRAF3-205ENST00000558700 DNAJC25-GNG10A0A024R161 153 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 ORC4O43929 436 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 MFAP1P55081 439 aaKnown RBP9.52□□□□□ -0.89
TRAF3-205ENST00000558700 SNX17Q15036 470 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 ALX1Q15699 326 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 TKFCQ3LXA3 575 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 MCMDC2Q4G0Z9 681 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 VPS53Q5VIR6 699 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 MAMDC4Q6UXC1 1216 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 SMC5Q8IY18 1101 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 CHURC1Q8WUH1 139 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 LNPKQ9C0E8 428 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
TRAF3-205ENST00000558700 LCTP09848 1927 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 RANBP6O60518 1105 aaKnown RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 PLA2G6O60733 806 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 PGK1P00558 417 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 PCP11498 1178 aaKnown RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 ADCYAP1R1P41586 468 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 NMIQ13287 307 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 TRIM60Q495X7 471 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 SLC39A5Q6ZMH5 540 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 ARMCX2Q7L311 632 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 DCAF4Q8WV16 495 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 FAM227BQ96M60 508 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 RNF146Q9NTX7 359 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-205ENST00000558700 FAM184BQ9ULE4 1060 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
TRAF3-205ENST00000558700 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 NMT2O60551 498 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 ADAMTS4O75173 837 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 FGRP09769 529 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 MCCP23508 829 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 NT5C2P49902 561 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 C6orf132Q5T0Z8 1188 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 KCTD1Q719H9 257 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 ZNF589Q86UQ0 364 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 CHD1LQ86WJ1 897 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 RILPL2Q969X0 211 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 LENG1Q96BZ8 264 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 ABHD16BQ9H3Z7 469 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 RNF41Q9H4P4 317 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-205ENST00000558700 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 PDLIM7Q9NR12 457 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 IL17RBQ9NRM6 502 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 DIAPH3Q9NSV4 1193 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
TRAF3-205ENST00000558700 MOXD2PA6NHM9 499 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 HIP1O00291 1037 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 DUSP11O75319 330 aaKnown RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 SNAI1O95863 264 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 FGAP02671 866 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms