RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NFIBO00712 420 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 SLC25A27O95847 323 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 SCG2P13521 617 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
NEDD1-213ENST00000557644 FKTNO75072 461 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 HSPA8P11142 646 aaKnown RBP17.65■□□□□ 0.42
NEDD1-213ENST00000557644 PSMC4P43686 418 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 CLEC4DQ8WXI8 215 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 SHISA4Q96DD7 197 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 TRIM47Q96LD4 638 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 TSHZ2Q9NRE2 1034 aa17.65■□□□□ 0.42
NEDD1-213ENST00000557644 MYH6P13533 1939 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 ZSWIM8A7E2V4 1837 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 OPLAHO14841 1288 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 CUL4AQ13619 759 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 NOM1Q5C9Z4 860 aaKnown RBP17.64■□□□□ 0.41
NEDD1-213ENST00000557644 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 SHCBP1Q8NEM2 672 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 LLPHQ9BRT6 129 aaKnown RBP17.64■□□□□ 0.41
NEDD1-213ENST00000557644 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 DEXIO95424 95 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 MAPK4P31152 587 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 TBC1D5Q92609 795 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 MROH8Q9H579 483 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 ACAD9Q9H845 621 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 GJB4Q9NTQ9 266 aa17.64■□□□□ 0.41
NEDD1-213ENST00000557644 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 STXBP3O00186 592 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 LBX1P52954 281 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 VPS54Q9P1Q0 977 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
NEDD1-213ENST00000557644 ABCB11O95342 1321 aa17.63■□□□□ 0.41
NEDD1-213ENST00000557644 TKFCQ3LXA3 575 aa17.62■□□□□ 0.41
NEDD1-213ENST00000557644 CWC22Q9HCG8 908 aaKnown RBP17.62■□□□□ 0.41
NEDD1-213ENST00000557644 TNPO2O14787 897 aaKnown RBP17.62■□□□□ 0.41
NEDD1-213ENST00000557644 FOSBP53539 338 aa17.62■□□□□ 0.41
NEDD1-213ENST00000557644 NSMFQ6X4W1 530 aa17.62■□□□□ 0.41
NEDD1-213ENST00000557644 PLEKHH3Q7Z736 793 aa17.62■□□□□ 0.41
NEDD1-213ENST00000557644 A1CFQ9NQ94 594 aaKnown RBP17.62■□□□□ 0.41
NEDD1-213ENST00000557644 PNMA2Q9UL42 364 aa17.62■□□□□ 0.41
NEDD1-213ENST00000557644 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
NEDD1-213ENST00000557644 COPB2P35606 906 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 NAPAP54920 295 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 FCGRTP55899 365 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 PGK2P07205 417 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 CTCFP49711 727 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-213ENST00000557644 KIF22Q14807 665 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 ANKRD35Q8N283 1001 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 MMP19Q99542 508 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 IVNS1ABPQ9Y6Y0 642 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 DOCK3Q8IZD9 2030 aa17.61■□□□□ 0.41
NEDD1-213ENST00000557644 ADAMTS3O15072 1205 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 FCER1AP12319 257 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 PTPREP23469 700 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 ERO1AQ96HE7 468 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 PURBQ96QR8 312 aaKnown RBP17.6■□□□□ 0.41
NEDD1-213ENST00000557644 CFBP00751 764 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 ADORA2AP29274 412 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 BAATQ14032 418 aaPredicted RBP17.6■□□□□ 0.41
NEDD1-213ENST00000557644 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 CYP39A1Q9NYL5 469 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 GABRQQ9UN88 632 aa17.6■□□□□ 0.41
NEDD1-213ENST00000557644 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.6■□□□□ 0.41
NEDD1-213ENST00000557644 GJB2P29033 226 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 HOXA13P31271 388 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-213ENST00000557644 RPS6P62753 249 aaKnown RBP17.59■□□□□ 0.41
NEDD1-213ENST00000557644 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
NEDD1-213ENST00000557644 TRAF1Q13077 416 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 GRB14Q14449 540 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 KCTD2Q14681 263 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 SMC3Q9UQE7 1217 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 SMCO2A6NFE2 343 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 MORN1Q5T089 497 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 USP17L6PQ6QN14 398 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 RNF207Q6ZRF8 634 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-213ENST00000557644 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
NEDD1-213ENST00000557644 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
NEDD1-213ENST00000557644 STRNO43815 780 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 COBLO75128 1261 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 CALML3P27482 149 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 CNTN2Q02246 1040 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 PRKCZQ05513 592 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.41
NEDD1-213ENST00000557644 UBE2SQ16763 222 aa17.58■□□□□ 0.4
NEDD1-213ENST00000557644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
NEDD1-213ENST00000557644 WASF1Q92558 559 aa17.58■□□□□ 0.4
NEDD1-213ENST00000557644 COL20A1Q9P218 1284 aa17.58■□□□□ 0.4
NEDD1-213ENST00000557644 MGAMO43451 1857 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 SLC15A5A6NIM6 579 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms