RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 NELFBQ8WX92 580 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 PIGSQ96S52 555 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 C7orf25Q9BPX7 421 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 RAB34Q9BZG1 259 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 LRRC27Q9C0I9 530 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 STK17AQ9UEE5 414 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 CTNND2Q9UQB3 1225 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
PPP4R3A-212ENST00000557382 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 SIPA1L1O43166 1804 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 BICDL2A1A5D9 508 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 PSMA7O14818 248 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 AKR1B1P15121 316 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 GCFC2P16383 781 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CASP1P29466 404 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 SHMT1P34896 483 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 COPB1P53618 953 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 NCBP1Q09161 790 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 TMEM266Q2M3C6 531 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 TCP11X2Q5H9J9 407 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 STRIP1Q5VSL9 837 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CC2D2BQ6DHV5 1058 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 PPP4R3AQ6IN85 833 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 APOBEC3HQ6NTF7 200 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CDC42EP5Q6NZY7 148 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CNNM4Q6P4Q7 775 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 TRIM65Q6PJ69 517 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 FOXR2Q6PJQ5 311 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 IGSF22Q8N9C0 903 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 RASSF8Q8NHQ8 419 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 MKL1Q969V6 931 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CALML4Q96GE6 196 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 MTMR9Q96QG7 549 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 CCDC94Q9BW85 323 aaPredicted RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 BLZF1Q9H2G9 400 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 DDX4Q9NQI0 724 aaKnown RBP10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 NYAP2Q9P242 653 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 SYNPO2Q9UMS6 1093 aa10.06□□□□□ -0.8
PPP4R3A-212ENST00000557382 PSME4Q14997 1843 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 PVALEFA0A1B0GWK0 134 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 A0A1W2PQC6 194 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 KCNJ18B7U540 433 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 MFAP3LO75121 409 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 PRCPP42785 496 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 CRKP46108 304 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 MRPL12P52815 198 aaKnown RBP10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 STX17P56962 302 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 PICALMQ13492 652 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 TUBB2AQ13885 445 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 KCNJ12Q14500 433 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 KRT31Q15323 416 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 LETM2Q2VYF4 491 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 SYT10Q6XYQ8 523 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 TMTC1Q8IUR5 882 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 FAM114A1Q8IWE2 563 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 DCAF4Q8WV16 495 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 IQCDQ96DY2 449 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 TUBB2BQ9BVA1 445 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
PPP4R3A-212ENST00000557382 N4BP3O15049 544 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 ZBTB5O15062 677 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 TEX33O43247 280 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 MMP10P09238 476 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CCDC175P0C221 793 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 PLCG1P19174 1290 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CCNE1P24864 410 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 RBL2Q08999 1139 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 SEPT2Q15019 361 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CALCRLQ16602 461 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 SMYD4Q8IYR2 804 aaPredicted RBP10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 SUPT20HQ8NEM7 779 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 STAMQ92783 540 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CUL5Q93034 780 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 CNKSR1Q969H4 720 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 FEZ1Q99689 392 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 TRIM9Q9C026 710 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 UBA5Q9GZZ9 404 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
PPP4R3A-212ENST00000557382 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms