RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
FOXN3-215ENST00000557261 TOGARAM1Q9Y4F4 1720 aa7.49□□□□□ -1.21
FOXN3-215ENST00000557261 AFF2P51816 1311 aa7.49□□□□□ -1.21
FOXN3-215ENST00000557261 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
FOXN3-215ENST00000557261 EP400Q96L91 3159 aa7.49□□□□□ -1.21
FOXN3-215ENST00000557261 SLC35F4A4IF30 521 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
FOXN3-215ENST00000557261 CPB1P15086 417 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 CDC25BP30305 580 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 POLR2BP30876 1174 aaKnown RBP7.48□□□□□ -1.21
FOXN3-215ENST00000557261 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
FOXN3-215ENST00000557261 PERM1Q5SV97 790 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
FOXN3-215ENST00000557261 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 SYNPOQ8N3V7 929 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 RAPGEF4Q8WZA2 1011 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 PLPPR2Q96GM1 343 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 PCDHA4Q9UN74 947 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
FOXN3-215ENST00000557261 RGS12O14924 1447 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 TNS2Q63HR2 1409 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 CDC14CA4D256 554 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 TSPAN6O43657 245 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 GHRHP01286 108 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 ITGA6P23229 1130 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 CTBSQ01459 385 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 NFE2Q16621 373 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-215ENST00000557261 C1orf141Q5JVX7 400 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 CNNM4Q6P4Q7 775 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 KISS1RQ969F8 398 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-215ENST00000557261 LTV1Q96GA3 475 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-215ENST00000557261 C8orf48Q96LL4 319 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
FOXN3-215ENST00000557261 ARHGEF4Q9NR80 690 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 TCEAL9Q9UHQ7 104 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 C5P01031 1676 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 ZNF831Q5JPB2 1677 aa7.47□□□□□ -1.21
FOXN3-215ENST00000557261 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
FOXN3-215ENST00000557261 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.21
FOXN3-215ENST00000557261 ITGB4P16144 1822 aa7.46□□□□□ -1.21
FOXN3-215ENST00000557261 A0A1W2PQU0 124 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 SHTN1A0MZ66 631 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 SOX1O00570 391 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 IPO8O15397 1037 aaKnown RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 VAMP4O75379 141 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 NME1P15531 152 aaKnown RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 CCNFP41002 786 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 TAF7Q15545 349 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 CT47A1Q5JQC4 288 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 ZKSCAN2Q63HK3 967 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF530Q6P9A1 599 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 MCM10Q7L590 875 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 C14orf80Q86SX3 495 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 AFAP1L2Q8N4X5 818 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF669Q96BR6 464 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 PRDM16Q9HAZ2 1276 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 CACNA2D2Q9NY47 1150 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 MAGEC2Q9UBF1 373 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-215ENST00000557261 PTPRCP08575 1304 aa7.46□□□□□ -1.22
FOXN3-215ENST00000557261 THSD7AQ9UPZ6 1657 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CTSBP07858 339 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 PHKG2P15735 406 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 EPHA1P21709 976 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 PDE6BP35913 854 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 GUCY2FP51841 1108 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CHRNA2Q15822 529 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 ATF7IPQ6VMQ6 1270 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 IFNL2Q8IZJ0 200 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 ATL2Q8NHH9 583 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 SSH1Q8WYL5 1049 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 EVI5LQ96CN4 794 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 DCAF5Q96JK2 942 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 SPOCK3Q9BQ16 436 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 THUMPD2Q9BTF0 503 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 EMILIN2Q9BXX0 1053 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 ASPSCR1Q9BZE9 553 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 SMC4Q9NTJ3 1288 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 GMIPQ9P107 970 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 KLHL3Q9UH77 587 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 TSPYL4Q9UJ04 414 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 MRPS23Q9Y3D9 190 aaKnown RBP7.45□□□□□ -1.22
FOXN3-215ENST00000557261 CSADQ9Y600 493 aa7.45□□□□□ -1.22
FOXN3-215ENST00000557261 DOT1LQ8TEK3 1739 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 RNMTO43148 476 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms