RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FGD1P98174 961 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
SLIRP-207ENST00000556831 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 ANO1Q5XXA6 986 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 GPR153Q6NV75 609 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
SLIRP-207ENST00000556831 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
SLIRP-207ENST00000556831 ANKLE1Q8NAG6 615 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
SLIRP-207ENST00000556831 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
SLIRP-207ENST00000556831 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 VCANP13611 3396 aa16.41■□□□□ 0.22
SLIRP-207ENST00000556831 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
SLIRP-207ENST00000556831 CYBAP13498 195 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 TRAF1Q13077 416 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 USH1GQ495M9 461 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 A1CFQ9NQ94 594 aaKnown RBP16.4■□□□□ 0.22
SLIRP-207ENST00000556831 DDX20Q9UHI6 824 aaKnown RBP16.4■□□□□ 0.22
SLIRP-207ENST00000556831 MCM3APO60318 1980 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
SLIRP-207ENST00000556831 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 DDAH1O94760 285 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 CALM1P0DP23 149 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 CALM2P0DP24 149 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 CALM3P0DP25 149 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 ANTXR2P58335 489 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 GRM4Q14833 912 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 PURBQ96QR8 312 aaKnown RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 ADD3Q9UEY8 706 aaKnown RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 ZHX1Q9UKY1 873 aaPredicted RBP16.39■□□□□ 0.21
SLIRP-207ENST00000556831 ABCB11O95342 1321 aa16.39■□□□□ 0.21
SLIRP-207ENST00000556831 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 ASB14A6NK59 587 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
SLIRP-207ENST00000556831 SEPT4O43236 478 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
SLIRP-207ENST00000556831 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 ZNF654Q8IZM8 581 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 LENG1Q96BZ8 264 aaPredicted RBP16.38■□□□□ 0.21
SLIRP-207ENST00000556831 FAM122AQ96E09 287 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 GPHNQ9NQX3 736 aaPredicted RBP16.38■□□□□ 0.21
SLIRP-207ENST00000556831 MAD2L2Q9UI95 211 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 OGDHLQ9ULD0 1010 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 ASTN1O14525 1302 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 LAMA3Q16787 3333 aa16.38■□□□□ 0.21
SLIRP-207ENST00000556831 SPTBN5Q9NRC6 3674 aaKnown RBP16.38■□□□□ 0.21
SLIRP-207ENST00000556831 DNAH12Q6ZR08 3092 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 RARBP10826 455 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 AKR1A1P14550 325 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 CALML3P27482 149 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 GNAQP50148 359 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 CNTN2Q02246 1040 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 RNF207Q6ZRF8 634 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 CYP39A1Q9NYL5 469 aa16.37■□□□□ 0.21
SLIRP-207ENST00000556831 MRPL11Q9Y3B7 192 aaKnown RBP16.37■□□□□ 0.21
SLIRP-207ENST00000556831 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 B4DLN1 442 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 PSMA5P28066 241 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 LIFRP42702 1097 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 MRPL12P52815 198 aaKnown RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 TROAPQ12815 778 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 DHX32Q7L7V1 743 aaKnown RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 MCF2L2Q86YR7 1114 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 ARRDC4Q8NCT1 418 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 DPF3Q92784 378 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 PRO3102Q9H379 93 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 ABHD16BQ9H3Z7 469 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 SEC63Q9UGP8 760 aaKnown RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 NAP1L2Q9ULW6 460 aaPredicted RBP16.36■□□□□ 0.21
SLIRP-207ENST00000556831 MYH6P13533 1939 aa16.36■□□□□ 0.21
SLIRP-207ENST00000556831 LRRC37A2A6NM11 1700 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms