RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 FGD4Q96M96 766 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
IFT43-212ENST00000556742 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
IFT43-212ENST00000556742 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
IFT43-212ENST00000556742 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 KCNB2Q92953 911 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 MTMR8Q96EF0 704 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
IFT43-212ENST00000556742 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 CNPY2Q9Y2B0 182 aa12.51□□□□□ -0.41
IFT43-212ENST00000556742 ASB14A6NK59 587 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 DDAH1O94760 285 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 SNAI1O95863 264 aaPredicted RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 HMGB1P09429 215 aaKnown RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 ZNF865P0CJ78 1059 aaPredicted RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 AKR1A1P14550 325 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 HSPA4P34932 840 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 CNTN2Q02246 1040 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 TRAF1Q13077 416 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 ABCB11O95342 1321 aa12.5□□□□□ -0.41
IFT43-212ENST00000556742 RANBP2P49792 3224 aaKnown RBP12.5□□□□□ -0.41
IFT43-212ENST00000556742 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 DNM1LO00429 736 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 NFIBO00712 420 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
IFT43-212ENST00000556742 CALM1P0DP23 149 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 CALM2P0DP24 149 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 CALM3P0DP25 149 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 COL6A1P12109 1028 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 KIF5BP33176 963 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
IFT43-212ENST00000556742 QRICH1Q2TAL8 776 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 ARMCX2Q7L311 632 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 C11orf49Q9H6J7 331 aa12.49□□□□□ -0.41
IFT43-212ENST00000556742 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
IFT43-212ENST00000556742 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
IFT43-212ENST00000556742 ASTN1O14525 1302 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 ZBTB5O15062 677 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 RARBP10826 455 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 EXOSC10Q01780 885 aaKnown RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 ACVR2BQ13705 512 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 BAATQ14032 418 aaPredicted RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 ADCK5Q3MIX3 580 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 USH1GQ495M9 461 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 DHX32Q7L7V1 743 aaKnown RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 DNERQ8NFT8 737 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 MORC4Q8TE76 937 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 FAM184BQ9ULE4 1060 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
IFT43-212ENST00000556742 MYH7BA7E2Y1 1941 aa12.48□□□□□ -0.41
IFT43-212ENST00000556742 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 CYTH3O43739 400 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 GNAQP50148 359 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 RPS6P62753 249 aaKnown RBP12.47□□□□□ -0.41
IFT43-212ENST00000556742 GHRHRQ02643 423 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 SLC30A10Q6XR72 485 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 MCF2L2Q86YR7 1114 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
IFT43-212ENST00000556742 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 XPNPEP3Q9NQH7 507 aa12.47□□□□□ -0.41
IFT43-212ENST00000556742 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
IFT43-212ENST00000556742 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
IFT43-212ENST00000556742 ZHX1Q9UKY1 873 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms