RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ARMCX2Q7L311 632 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 C7orf61Q8IZ16 206 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 ADGRF4Q8IZF3 695 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 MSL3Q8N5Y2 521 aaKnown RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 NCOA7Q8NI08 942 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 IGDCC4Q8TDY8 1250 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 SENP6Q9GZR1 1112 aaPredicted RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 JMJD4Q9H9V9 463 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 VAT1LQ9HCJ6 419 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 NRBP1Q9UHY1 535 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 COLQQ9Y215 455 aaPredicted RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.48□□□□□ -0.89
VTI1B-206ENST00000556461 MYADML2A6NDP7 307 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 DNM1LO00429 736 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 MYCNP04198 464 aaPredicted RBP9.48□□□□□ -0.89
VTI1B-206ENST00000556461 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
VTI1B-206ENST00000556461 ACVR2BQ13705 512 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 QRICH1Q2TAL8 776 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 USH1GQ495M9 461 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 ASPRV1Q53RT3 343 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 CHRDL2Q6WN34 429 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 RALYLQ86SE5 291 aaKnown RBP9.48□□□□□ -0.89
VTI1B-206ENST00000556461 TBC1D5Q92609 795 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 ZMYND8Q9ULU4 1186 aaPredicted RBP9.48□□□□□ -0.89
VTI1B-206ENST00000556461 CNPY2Q9Y2B0 182 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 LCTP09848 1927 aa9.48□□□□□ -0.89
VTI1B-206ENST00000556461 MCM3APO60318 1980 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 PALM3A6NDB9 673 aaPredicted RBP9.47□□□□□ -0.89
VTI1B-206ENST00000556461 PPP1R11O60927 126 aaPredicted RBP9.47□□□□□ -0.89
VTI1B-206ENST00000556461 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 CDC45O75419 566 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 RARBP10826 455 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 AKR1A1P14550 325 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 SYN1P17600 705 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 CALML3P27482 149 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 TROAPQ12815 778 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 GRM4Q14833 912 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 WTAPQ15007 396 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 TMEM67Q5HYA8 995 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 EEPD1Q7L9B9 569 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 ARRDC4Q8NCT1 418 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 MYL10Q9BUA6 226 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 LRRC2Q9BYS8 371 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 XPNPEP3Q9NQH7 507 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 PDGFCQ9NRA1 345 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 FAM184BQ9ULE4 1060 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 NR2E3Q9Y5X4 410 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 WDR19Q8NEZ3 1342 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 SYNRGQ9UMZ2 1314 aa9.47□□□□□ -0.89
VTI1B-206ENST00000556461 PTPDC1A2A3K4 754 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 KLRF2D3W0D1 207 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 SH2B2O14492 632 aaPredicted RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 CTAGE5O15320 804 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 PRC1O43663 620 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 CYTH3O43739 400 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 DHX16O60231 1041 aaKnown RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 NEFLP07196 543 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 ALDH5A1P51649 535 aaPredicted RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 RPS6P62753 249 aaKnown RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 HABP4Q5JVS0 413 aaKnown RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 TAPT1Q6NXT6 567 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 RNF207Q6ZRF8 634 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 FBXO16Q8IX29 292 aaPredicted RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 KLHDC9Q8NEP7 349 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 MORC4Q8TE76 937 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 MTMR8Q96EF0 704 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 ABHD16BQ9H3Z7 469 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 COL20A1Q9P218 1284 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
VTI1B-206ENST00000556461 PHF24Q9UPV7 400 aa9.46□□□□□ -0.9
VTI1B-206ENST00000556461 ASB14A6NK59 587 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 OPLAHO14841 1288 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 DUSP11O75319 330 aaKnown RBP9.45□□□□□ -0.9
VTI1B-206ENST00000556461 SMPD1P17405 629 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 RTP1P59025 263 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 ADCK5Q3MIX3 580 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 TRIM60Q495X7 471 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 SLC39A5Q6ZMH5 540 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 ZNF654Q8IZM8 581 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 NUP133Q8WUM0 1156 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 RIOX1Q9H6W3 641 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 ABCB11O95342 1321 aa9.45□□□□□ -0.9
VTI1B-206ENST00000556461 LRRC37A2A6NM11 1700 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms