RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 TFRCP02786 760 aaKnown RBP13.5□□□□□ -0.25
SLIRP-205ENST00000556310 ICAM1P05362 532 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 CYBAP13498 195 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 CCND3P30281 292 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-205ENST00000556310 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 CCDC174Q6PII3 467 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 MB21D2Q8IYB1 491 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-205ENST00000556310 ANKLE1Q8NAG6 615 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 AGBL1Q96MI9 1066 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 HOMER2Q9NSB8 354 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
SLIRP-205ENST00000556310 WDR19Q8NEZ3 1342 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 ERICH2A1L162 156 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 SLC27A2O14975 620 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 MSCO60682 206 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 ALAS1P13196 640 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 SNAP25P60880 206 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
SLIRP-205ENST00000556310 NECTIN1Q15223 517 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
SLIRP-205ENST00000556310 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 CEP290O15078 2479 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
SLIRP-205ENST00000556310 PFASO15067 1338 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
SLIRP-205ENST00000556310 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
SLIRP-205ENST00000556310 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 ANTXR2P58335 489 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 LHX8Q68G74 356 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 TINF2Q9BSI4 451 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
SLIRP-205ENST00000556310 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
SLIRP-205ENST00000556310 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
SLIRP-205ENST00000556310 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 SEPT4O43236 478 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 CNGA1P29973 690 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 WTAPQ15007 396 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 FGD4Q96M96 766 aa13.47□□□□□ -0.25
SLIRP-205ENST00000556310 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-205ENST00000556310 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-205ENST00000556310 MUM1L1Q5H9M0 696 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 TMEM67Q5HYA8 995 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 CPVLQ9H3G5 476 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 CYP39A1Q9NYL5 469 aa13.46□□□□□ -0.25
SLIRP-205ENST00000556310 PRC1O43663 620 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 MCM5P33992 734 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 GRM4Q14833 912 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
SLIRP-205ENST00000556310 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 DIS3LQ8TF46 1054 aaKnown RBP13.45□□□□□ -0.26
SLIRP-205ENST00000556310 PAWRQ96IZ0 340 aaKnown RBP13.45□□□□□ -0.26
SLIRP-205ENST00000556310 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
SLIRP-205ENST00000556310 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-205ENST00000556310 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 NFIBO00712 420 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
SLIRP-205ENST00000556310 CNTN2Q02246 1040 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 TROAPQ12815 778 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 CLEC4DQ8WXI8 215 aa13.44□□□□□ -0.26
SLIRP-205ENST00000556310 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
SLIRP-205ENST00000556310 ABCB11O95342 1321 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-205ENST00000556310 DDAH1O94760 285 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 REC8O95072 547 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-205ENST00000556310 ZNF865P0CJ78 1059 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-205ENST00000556310 AKR1A1P14550 325 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-205ENST00000556310 KRT32Q14532 448 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 IER5LQ5T953 404 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms