RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SMIM22	K7EJ46	135 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	PPIP5K2	O43314	1243 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	MFAP3L	O75121	409 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	EARS2	Q5JPH6	523 aa	Known RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CLEC4G	Q6UXB4	293 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	NELFB	Q8WX92	580 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CUL5	Q93034	780 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CALML3	P27482	149 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	PLA2G4A	P47712	749 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	PLS1	Q14651	629 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC122	Q5T0U0	273 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	TMTC1	Q8IUR5	882 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	JDP2	Q8WYK2	163 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	TAOK3	Q9H2K8	898 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	C6orf50	Q9HD87	102 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	BSDC1	Q9NW68	430 aa	Predicted RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029		A0A087X0B3	334 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	ATP8B1	O43520	1251 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	DDAH1	O94760	285 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CAMTA2	O94983	1202 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	NFIX	Q14938	502 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	SEC23A	Q15436	765 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	RAD9B	Q6WBX8	426 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	PNMA1	Q8ND90	353 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	XDH	P47989	1333 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	TACC1	O75410	805 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	SCG2	P13521	617 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	DPYD	Q12882	1025 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	ACRBP	Q8NEB7	543 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	MRRF	Q96E11	262 aa	Known RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC51	Q96ER9	411 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC114	Q96M63	670 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	ADD3	Q9UEY8	706 aa	Known RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	HDAC9	Q9UKV0	1011 aa		13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	LUC7L2	Q9Y383	392 aa	Known RBP	13.66	□□□□□ -0.22
TMPO-212	ENST00000556029	KRT9	P35527	623 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	CYP26C1	Q6V0L0	522 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	TMTC3	Q6ZXV5	915 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	SRGAP1	Q7Z6B7	1085 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	TRIM31	Q9BZY9	425 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	CDC23	Q9UJX2	597 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	KRT86	O43790	486 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	CETN1	Q12798	172 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	PKN1	Q16512	942 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	NLGN1	Q8N2Q7	840 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	SLF1	Q9BQI6	1058 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	CCDC160	A6NGH7	325 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	KCNJ18	B7U540	433 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	NMT2	O60551	498 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	CDC25A	P30304	524 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	PRKG1	Q13976	671 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	KCNJ12	Q14500	433 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	KRT31	Q15323	416 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	RASGRP4	Q8TDF6	673 aa		13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	NAPG	Q99747	312 aa	Predicted RBP	13.65	□□□□□ -0.22
TMPO-212	ENST00000556029	BCL9	O00512	1426 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	GTPBP6	O43824	516 aa	Predicted RBP	13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	ATP2B4	P23634	1241 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	COPB1	P53618	953 aa	Known RBP	13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	CACNB3	P54284	484 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	DTHD1	Q6ZMT9	781 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	SLC35F6	Q8N357	371 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	BRIP1	Q9BX63	1249 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	PKD2L1	Q9P0L9	805 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	CUL4B	Q13620	913 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	PPP1R14C	Q8TAE6	165 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	FANCG	O15287	622 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	ZBTB16	Q05516	673 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	LONRF2	Q1L5Z9	754 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	SLC44A5	Q8NCS7	719 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	CEP63	Q96MT8	703 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	MED15	Q96RN5	788 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	ZCCHC17	Q9NP64	241 aa	Known RBP	13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	ANAPC4	Q9UJX5	808 aa		13.64	□□□□□ -0.23
TMPO-212	ENST00000556029	PPP1R3G	B7ZBB8	358 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	SEMA3E	O15041	775 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	MXRA7	P84157	204 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	BRD3	Q15059	726 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	CPVL	Q9H3G5	476 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	RPN1	P04843	607 aa	Known RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	IVL	P07476	585 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	ALDH1B1	P30837	517 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	TXK	P42681	527 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	ZNF772	Q68DY9	489 aa	Predicted RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	KIFC2	Q96AC6	838 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	C4A	P0C0L4	1744 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	C4B	P0C0L5	1744 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	USP17L3	A6NCW0	530 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	USP17L4	A6NCW7	530 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	PPEF1	O14829	653 aa	Predicted RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	PC	P11498	1178 aa	Known RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	FXR1	P51114	621 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	ATP2C1	P98194	919 aa	Predicted RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	TRIM14	Q14142	442 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	USH1G	Q495M9	461 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	DPH6	Q7L8W6	267 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	USP17L1	Q7RTZ2	530 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms