RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 CDC25AP30304 524 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 FANCCQ00597 558 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 RRAGBQ5VZM2 374 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 HSD3B7Q9H2F3 369 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 ARHGEF10LQ9HCE6 1279 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 IFNKQ9P0W0 207 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 IMPACTQ9P2X3 320 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 PCDHA1Q9Y5I3 950 aa11.41□□□□□ -0.58
EFCAB11-209ENST00000556005 OFD1O75665 1012 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 NDUFB10O96000 172 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 GSDMDP57764 484 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 CUEDC2Q9H467 287 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 CNTNAP1P78357 1384 aa11.4□□□□□ -0.58
EFCAB11-209ENST00000556005 TMEM232C9JQI7 657 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 WNT10BO00744 389 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 TECP42680 631 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 TNNI2P48788 182 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 UBASH3AP57075 661 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 JAG1P78504 1218 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 CALCRLQ16602 461 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 TMEM266Q2M3C6 531 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 MCTP2Q6DN12 878 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 CABP7Q86V35 215 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 KIAA1524Q8TCG1 905 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 STAMQ92783 540 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 MTMR9Q96QG7 549 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 AMNQ9BXJ7 453 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 RAB34Q9BZG1 259 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 MAGEF1Q9HAY2 307 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 GOPCQ9HD26 462 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 MYOZ2Q9NPC6 264 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 NFE2L3Q9Y4A8 694 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.59
EFCAB11-209ENST00000556005 A0A1W2PRG0 241 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 ATP1A3P13637 1013 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 CASP1P29466 404 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 TXKP42681 527 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 SEMA3FQ13275 785 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 CUL4BQ13620 913 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 UBE2SQ16763 222 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 SYDE2Q5VT97 1194 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 BTNL9Q6UXG8 535 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 MTRQ99707 1265 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 BLZF1Q9H2G9 400 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
EFCAB11-209ENST00000556005 PP2D1A8MPX8 630 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 TRAF1Q13077 416 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 PDIA5Q14554 519 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 NAALADL2Q58DX5 795 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 FBXO11Q86XK2 927 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 IGSF22Q8N9C0 903 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 NUP88Q99567 741 aaPredicted RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 SH2D4AQ9H788 454 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 ZBTB21Q9ULJ3 1066 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 NFKBIEO00221 500 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 TDP2O95551 362 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 RPN1P04843 607 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 USP11P51784 963 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 STAT2P52630 851 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 AMPD3Q01432 767 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 AP3B2Q13367 1082 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 SPATA1Q5VX52 437 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 MIGA2Q7L4E1 593 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 DDX25Q9UHL0 483 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 PYCARDQ9ULZ3 195 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
EFCAB11-209ENST00000556005 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms