RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 CYP2C19P33261 490 aa26.59■■□□□ 1.85
CDKN3-208ENST00000555837 BLOC1S2Q6QNY1 142 aa26.59■■□□□ 1.85
CDKN3-208ENST00000555837 MAMDC4Q6UXC1 1216 aa26.59■■□□□ 1.85
CDKN3-208ENST00000555837 FBXO11Q86XK2 927 aa26.59■■□□□ 1.85
CDKN3-208ENST00000555837 A1CFQ9NQ94 594 aaKnown RBP26.59■■□□□ 1.85
CDKN3-208ENST00000555837 FLRT1Q9NZU1 646 aa26.59■■□□□ 1.85
CDKN3-208ENST00000555837 SNAP25P60880 206 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 PPP2R5BQ15173 497 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 NSMFQ6X4W1 530 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 SAMD3Q8N6K7 520 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 CRISPLD2Q9H0B8 497 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 VAT1LQ9HCJ6 419 aa26.58■■□□□ 1.85
CDKN3-208ENST00000555837 ZBTB5O15062 677 aa26.57■■□□□ 1.84
CDKN3-208ENST00000555837 SEPT4O43236 478 aa26.57■■□□□ 1.84
CDKN3-208ENST00000555837 TRIM32Q13049 653 aa26.57■■□□□ 1.84
CDKN3-208ENST00000555837 JMJD4Q9H9V9 463 aa26.57■■□□□ 1.84
CDKN3-208ENST00000555837 CYP39A1Q9NYL5 469 aa26.57■■□□□ 1.84
CDKN3-208ENST00000555837 IGHA2P01877 340 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 CYBAP13498 195 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 RCAN1P53805 252 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 EXOSC10Q01780 885 aaKnown RBP26.56■■□□□ 1.84
CDKN3-208ENST00000555837 RNF207Q6ZRF8 634 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 RASEFQ8IZ41 740 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 JAKMIP1Q96N16 626 aaKnown RBP26.56■■□□□ 1.84
CDKN3-208ENST00000555837 ABHD16BQ9H3Z7 469 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 RIOX1Q9H6W3 641 aa26.56■■□□□ 1.84
CDKN3-208ENST00000555837 RBM28Q9NW13 759 aaKnown RBP26.56■■□□□ 1.84
CDKN3-208ENST00000555837 MAP3K20Q9NYL2 800 aaKnown RBP26.56■■□□□ 1.84
CDKN3-208ENST00000555837 DDX20Q9UHI6 824 aaKnown RBP26.56■■□□□ 1.84
CDKN3-208ENST00000555837 PTPDC1A2A3K4 754 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 QRICH1Q2TAL8 776 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 STAG2Q8N3U4 1231 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 FAM133AQ8N9E0 248 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 HTATIP2Q9BUP3 242 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 SEC63Q9UGP8 760 aaKnown RBP26.55■■□□□ 1.84
CDKN3-208ENST00000555837 OGDHLQ9ULD0 1010 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 SNX14Q9Y5W7 946 aa26.55■■□□□ 1.84
CDKN3-208ENST00000555837 CCDC196A0A1B0GTZ2 297 aa26.54■■□□□ 1.84
CDKN3-208ENST00000555837 FARP2O94887 1054 aaPredicted RBP26.54■■□□□ 1.84
CDKN3-208ENST00000555837 USH1GQ495M9 461 aa26.54■■□□□ 1.84
CDKN3-208ENST00000555837 ARRDC4Q8NCT1 418 aa26.54■■□□□ 1.84
CDKN3-208ENST00000555837 RRP36Q96EU6 259 aaKnown RBP26.54■■□□□ 1.84
CDKN3-208ENST00000555837 SPZ1Q9BXG8 430 aa26.54■■□□□ 1.84
CDKN3-208ENST00000555837 USP26Q9BXU7 913 aa26.54■■□□□ 1.84
CDKN3-208ENST00000555837 PLXNA1Q9UIW2 1896 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 CENPFP49454 3210 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 PNMA6FA0A0J9YX94 578 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 AKR1A1P14550 325 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 CCND3P30281 292 aaPredicted RBP26.53■■□□□ 1.84
CDKN3-208ENST00000555837 MUM1L1Q5H9M0 696 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 FANCBQ8NB91 859 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 DNERQ8NFT8 737 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 MTMR8Q96EF0 704 aa26.53■■□□□ 1.84
CDKN3-208ENST00000555837 ADCK5Q3MIX3 580 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 NECAB2Q7Z6G3 386 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 FBXL16Q8N461 479 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 TM6SF1Q9BZW5 370 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 FAM184BQ9ULE4 1060 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 PCDHA1Q9Y5I3 950 aa26.52■■□□□ 1.84
CDKN3-208ENST00000555837 ZBTB43O43298 467 aa26.51■■□□□ 1.83
CDKN3-208ENST00000555837 RARBP10826 455 aa26.51■■□□□ 1.83
CDKN3-208ENST00000555837 BAATQ14032 418 aaPredicted RBP26.51■■□□□ 1.83
CDKN3-208ENST00000555837 CPVLQ9H3G5 476 aa26.51■■□□□ 1.83
CDKN3-208ENST00000555837 SENP2Q9HC62 589 aa26.51■■□□□ 1.83
CDKN3-208ENST00000555837 CYP46A1Q9Y6A2 500 aa26.51■■□□□ 1.83
CDKN3-208ENST00000555837 NFIBO00712 420 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 CASTP20810 708 aaKnown RBP26.5■■□□□ 1.83
CDKN3-208ENST00000555837 ANAPC15P60006 121 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 ARMCX2Q7L311 632 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 HOMER1Q86YM7 354 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 CLEC4DQ8WXI8 215 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 SHISA4Q96DD7 197 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 LRRC2Q9BYS8 371 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 SPC25Q9HBM1 224 aa26.5■■□□□ 1.83
CDKN3-208ENST00000555837 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.5■■□□□ 1.83
CDKN3-208ENST00000555837 RPS6KB1P23443 525 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 CALML3P27482 149 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 ACVR2BQ13705 512 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 LHX8Q68G74 356 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 APOA5Q6Q788 366 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 MICU3Q86XE3 530 aa26.49■■□□□ 1.83
CDKN3-208ENST00000555837 RPS6P62753 249 aaKnown RBP26.48■■□□□ 1.83
CDKN3-208ENST00000555837 CNTN2Q02246 1040 aa26.48■■□□□ 1.83
CDKN3-208ENST00000555837 RUFY3Q7L099 469 aa26.48■■□□□ 1.83
CDKN3-208ENST00000555837 CCDC144CPQ8IYA2 1237 aa26.48■■□□□ 1.83
CDKN3-208ENST00000555837 ZHX1Q9UKY1 873 aaPredicted RBP26.48■■□□□ 1.83
CDKN3-208ENST00000555837 RTN1Q16799 776 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 Q6ZUG5 572 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 TEX2Q8IWB9 1127 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 PIGSQ96S52 555 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 MYL10Q9BUA6 226 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 VTA1Q9NP79 307 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 GPHNQ9NQX3 736 aaPredicted RBP26.47■■□□□ 1.83
CDKN3-208ENST00000555837 NAP1L2Q9ULW6 460 aaPredicted RBP26.47■■□□□ 1.83
CDKN3-208ENST00000555837 MYH6P13533 1939 aa26.47■■□□□ 1.83
CDKN3-208ENST00000555837 KLF18A0A0U1RQI7 1052 aa26.46■■□□□ 1.83
CDKN3-208ENST00000555837 KBTBD13C9JR72 458 aa26.46■■□□□ 1.83
CDKN3-208ENST00000555837 SNAI1O95863 264 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-208ENST00000555837 RNF180Q86T96 592 aa26.46■■□□□ 1.83
CDKN3-208ENST00000555837 TRPV1Q8NER1 839 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms