RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 TDHQ8IZJ6 230 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 KATNBL1Q9H079 304 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 LRRC37A2A6NM11 1700 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 MYH6P13533 1939 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 A0A1W2PQ45 241 aaPredicted RBP16.2■□□□□ 0.18
PCNX4-209ENST00000555569 A0A1W2PQY0 241 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
PCNX4-209ENST00000555569 ADCY6O43306 1168 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
PCNX4-209ENST00000555569 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 ANKS1AQ92625 1134 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
PCNX4-209ENST00000555569 KRT23Q9C075 422 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 KAT14Q9H8E8 782 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 CNNM2Q9H8M5 875 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 ZSWIM5Q9P217 1185 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 PNMA2Q9UL42 364 aa16.2■□□□□ 0.18
PCNX4-209ENST00000555569 ASTN1O14525 1302 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 MYADML2A6NDP7 307 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 MOXD2PA6NHM9 499 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 CHMLP26374 656 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 CST5P28325 142 aaPredicted RBP16.19■□□□□ 0.18
PCNX4-209ENST00000555569 ACLYP53396 1101 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 KCNA10Q16322 511 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 ENAHQ8N8S7 591 aaPredicted RBP16.19■□□□□ 0.18
PCNX4-209ENST00000555569 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 UPF3AQ9H1J1 476 aaKnown RBP16.19■□□□□ 0.18
PCNX4-209ENST00000555569 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
PCNX4-209ENST00000555569 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 TNKSO95271 1327 aa16.19■□□□□ 0.18
PCNX4-209ENST00000555569 NFIBO00712 420 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
PCNX4-209ENST00000555569 GOLGA8HP0CJ92 632 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 GJA9P57773 515 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 TLE2Q04725 743 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 BAATQ14032 418 aaPredicted RBP16.18■□□□□ 0.18
PCNX4-209ENST00000555569 CCSAPQ6IQ19 270 aaPredicted RBP16.18■□□□□ 0.18
PCNX4-209ENST00000555569 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
PCNX4-209ENST00000555569 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 PDLIM7Q9NR12 457 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
PCNX4-209ENST00000555569 LAMA3Q16787 3333 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.17■□□□□ 0.18
PCNX4-209ENST00000555569 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
PCNX4-209ENST00000555569 TNFAIP2Q03169 654 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 LRIT3Q3SXY7 679 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 MORC4Q8TE76 937 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 PURBQ96QR8 312 aaKnown RBP16.17■□□□□ 0.18
PCNX4-209ENST00000555569 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 STARD7Q9NQZ5 370 aa16.17■□□□□ 0.18
PCNX4-209ENST00000555569 ADD3Q9UEY8 706 aaKnown RBP16.17■□□□□ 0.18
PCNX4-209ENST00000555569 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
PCNX4-209ENST00000555569 CLTBP09497 229 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
PCNX4-209ENST00000555569 PTH1RQ03431 593 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
PCNX4-209ENST00000555569 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
PCNX4-209ENST00000555569 GLT1D1Q96MS3 346 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
PCNX4-209ENST00000555569 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 CTAGE5O15320 804 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 PQBP1O60828 265 aaKnown RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 ASGR1P07306 291 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 CALML3P27482 149 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 NKX3-2P78367 333 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 TRDNQ13061 729 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 IFIT1BQ5T764 474 aaKnown RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 TAPT1Q6NXT6 567 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 RNF207Q6ZRF8 634 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 BADQ92934 168 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 PDGFCQ9NRA1 345 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
PCNX4-209ENST00000555569 ELP1O95163 1332 aa16.15■□□□□ 0.18
PCNX4-209ENST00000555569 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 SGSM2O43147 1006 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 CYP21A2P08686 494 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 SMPD1P17405 629 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 BEX3Q00994 111 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 SEC23AQ15436 765 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 CDC37Q16543 378 aaPredicted RBP16.14■□□□□ 0.17
PCNX4-209ENST00000555569 USH1GQ495M9 461 aa16.14■□□□□ 0.17
PCNX4-209ENST00000555569 GPR153Q6NV75 609 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms