RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 PNMA1Q8ND90 353 aa11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 CHST13Q8NET6 341 aa11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-219ENST00000555309 MCM3APO60318 1980 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 NFIBO00712 420 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 PGK1P00558 417 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 COPB2P35606 906 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 SEC23AQ15436 765 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 FERMT2Q96AC1 680 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 RBM8AQ9Y5S9 174 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-219ENST00000555309 E7EWF7 191 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 ICAM1P05362 532 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 SLC35G1Q2M3R5 365 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 HABP4Q5JVS0 413 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 FAM133AQ8N9E0 248 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 VAT1LQ9HCJ6 419 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 ANTXR2P58335 489 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 CUL4AQ13619 759 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 LRRC41Q15345 812 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 MAMDC4Q6UXC1 1216 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 CLEC4DQ8WXI8 215 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 KRT23Q9C075 422 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 CYP39A1Q9NYL5 469 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-219ENST00000555309 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 FDX1P10109 184 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 ADCYAP1R1P41586 468 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 NEK4P51957 841 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 ACVR2BQ13705 512 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 USH1GQ495M9 461 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 SLC30A10Q6XR72 485 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 EEPD1Q7L9B9 569 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 ADGRF4Q8IZF3 695 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 PDGFCQ9NRA1 345 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 SNX14Q9Y5W7 946 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 LCTP09848 1927 aa11.71□□□□□ -0.54
HNRNPC-219ENST00000555309 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 DNM1LO00429 736 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 MSCO60682 206 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 MCM4P33991 863 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 NUCB2P80303 420 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 NECTIN1Q15223 517 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 PRO3102Q9H379 93 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 SYNGAP1Q96PV0 1343 aa11.7□□□□□ -0.54
HNRNPC-219ENST00000555309 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 RARBP10826 455 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 PTMSP20962 102 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 CALML3P27482 149 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 TKFCQ3LXA3 575 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 SLC27A2O14975 620 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 AKR1A1P14550 325 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 CAPN2P17655 700 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 CDC37Q16543 378 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 TSGA10IPQ3SY00 556 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
HNRNPC-219ENST00000555309 MYL10Q9BUA6 226 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms