RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 IFIT1BQ5T764 474 aaKnown RBP10.21□□□□□ -0.77
ACTN1-213ENST00000554508 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 NSMFQ6X4W1 530 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 MAP4K1Q92918 833 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 SPC25Q9HBM1 224 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 PHF24Q9UPV7 400 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 TNKSO95271 1327 aa10.21□□□□□ -0.78
ACTN1-213ENST00000554508 BAZ2BQ9UIF8 2168 aaKnown RBP10.21□□□□□ -0.78
ACTN1-213ENST00000554508 SOWAHBA6NEL2 793 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 MOXD2PA6NHM9 499 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 ADAMTS4O75173 837 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 PGK1P00558 417 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 CYP21A2P08686 494 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 PARP1P09874 1014 aaKnown RBP10.2□□□□□ -0.78
ACTN1-213ENST00000554508 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 SYN1P17600 705 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 GJA9P57773 515 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 BAATQ14032 418 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-213ENST00000554508 SNX17Q15036 470 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 KIAA1211Q6ZU35 1233 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 PCSK9Q8NBP7 692 aaKnown RBP10.2□□□□□ -0.78
ACTN1-213ENST00000554508 RGS22Q8NE09 1264 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 KLHDC9Q8NEP7 349 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 NCOA7Q8NI08 942 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 KATNBL1Q9H079 304 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 PRKAG2Q9UGJ0 569 aa10.2□□□□□ -0.78
ACTN1-213ENST00000554508 DNAH12Q6ZR08 3092 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 SYNRGQ9UMZ2 1314 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 ERICH2A1L162 156 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 B4DLN1 442 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 E7EWF7 191 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 CST5P28325 142 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 MAGEA10P43363 369 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 NKX3-2P78367 333 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 TNFAIP2Q03169 654 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 SEC23AQ15436 765 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 IQSEC1Q6DN90 963 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 RNF207Q6ZRF8 634 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 ADGRF4Q8IZF3 695 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 CLEC4DQ8WXI8 215 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 FERMT2Q96AC1 680 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 MPHOSPH6Q99547 160 aaKnown RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 UBA5Q9GZZ9 404 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 UPF3AQ9H1J1 476 aaKnown RBP10.19□□□□□ -0.78
ACTN1-213ENST00000554508 VTA1Q9NP79 307 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 ATP11BQ9Y2G3 1177 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 LRRC37A2A6NM11 1700 aa10.19□□□□□ -0.78
ACTN1-213ENST00000554508 A0A1W2PQ45 241 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 A0A1W2PQY0 241 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 NFIBO00712 420 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 IFIT3O14879 490 aaKnown RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 C6orf222P0C671 652 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 ACLYP53396 1101 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 KCNA10Q16322 511 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 CDC37Q16543 378 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 BMP2KLQ5H9B9 411 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 CCSAPQ6IQ19 270 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 DNERQ8NFT8 737 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 LBHD1Q9BQE6 289 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 UBE2OQ9C0C9 1292 aaKnown RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 Q9Y3F1 56 aa10.18□□□□□ -0.78
ACTN1-213ENST00000554508 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 RANBP2P49792 3224 aaKnown RBP10.18□□□□□ -0.78
ACTN1-213ENST00000554508 KIAA1217Q5T5P2 1943 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 LTBP2Q14767 1821 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ASTN1O14525 1302 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ELP1O95163 1332 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ABCB11O95342 1321 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 KLRF2D3W0D1 207 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ADCY6O43306 1168 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 DHX16O60231 1041 aaKnown RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 CALML3P27482 149 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ALDH5A1P51649 535 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 RPS6P62753 249 aaKnown RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 TLE2Q04725 743 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 WTAPQ15007 396 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 USH1GQ495M9 461 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 TRIM60Q495X7 471 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 TAPT1Q6NXT6 567 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 FBXO11Q86XK2 927 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 MCF2L2Q86YR7 1114 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 GLT1D1Q96MS3 346 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 TOX2Q96NM4 488 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 MTA3Q9BTC8 594 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 LSG1Q9H089 658 aaKnown RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 CPVLQ9H3G5 476 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 JMJD4Q9H9V9 463 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms