RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 PRR29P0C7W0 189 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 EEF2P13639 858 aaKnown RBP16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 AFMP43652 599 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 POSTNQ15063 836 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 PSMD1Q99460 953 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZMYND12Q9H0C1 365 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 HNRNPH2P55795 449 aaKnown RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 SEPT2Q15019 361 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 IL17AQ16552 155 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 CASP1P29466 404 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 ADKP55263 362 aaKnown RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 STAMQ92783 540 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC34Q96HJ3 373 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 C6orf50Q9HD87 102 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 PIM2Q9P1W9 311 aa16.54■□□□□ 0.24
PPP4R3A-201ENST00000554308 FOCADQ5VW36 1801 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 SNHG28P0DPA3 235 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 GNG11P61952 73 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 ACTN4O43707 911 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 TBC1D8O95759 1140 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 GNA11P29992 359 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 TEX35Q5T0J7 233 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 TRMT44Q8IYL2 757 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 VEZTQ9HBM0 779 aa16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-201ENST00000554308 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
PPP4R3A-201ENST00000554308 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
PPP4R3A-201ENST00000554308 FMR1Q06787 632 aaKnown RBP eCLIP16.52■□□□□ 0.245e-7■■■■□ 19.4
PPP4R3A-201ENST00000554308 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
PPP4R3A-201ENST00000554308 TMEM260Q9NX78 707 aa16.52■□□□□ 0.24
PPP4R3A-201ENST00000554308 MYO3BQ8WXR4 1341 aa16.52■□□□□ 0.24
PPP4R3A-201ENST00000554308 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 USP17L10C9JJH3 530 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 CCP110O43303 1012 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 TUBB4AP04350 444 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 SMARCA1P28370 1054 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.23
PPP4R3A-201ENST00000554308 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 SLC1A4P43007 532 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 GYS2P54840 703 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 JAG1P78504 1218 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 ICA1Q05084 483 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 KARSQ15046 597 aaKnown RBP16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 TATDN1Q6P1N9 297 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 C4orf32Q8N8J7 132 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 DAGLBQ8NCG7 672 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 SMARCE1Q969G3 411 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 HDAC9Q9UKV0 1011 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 GH2P01242 217 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 CAPN2P17655 700 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 MTF1Q14872 753 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 ZNRF3Q9ULT6 936 aa16.51■□□□□ 0.23
PPP4R3A-201ENST00000554308 A0A0U1RQJ8 604 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 ARHGAP6O43182 974 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 ENTPD3O75355 529 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 OAS2P29728 719 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 CASQ1P31415 396 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 TBX2Q13207 712 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 ATRIPQ8WXE1 791 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 COL4A5P29400 1685 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-201ENST00000554308 POLD1P28340 1107 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms