RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 USP17L6PQ6QN14 398 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 GJA10Q969M2 543 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 NRBP1Q9UHY1 535 aa14.48□□□□□ -0.09
VIPAS39-206ENST00000553888 MYO1BO43795 1136 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 ZNF75DP51815 510 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 PAGE5Q96GU1 130 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 BLZF1Q9H2G9 400 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 FZD1Q9UP38 647 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 ESYT2A0FGR8 921 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 SLC37A4O43826 429 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 DGKZQ13574 1117 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 TNIP1Q15025 636 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 LRRC15Q8TF66 581 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 MTRQ99707 1265 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 MORC2Q9Y6X9 1032 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-206ENST00000553888 NCAPHQ15003 741 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 HSP90AA4PQ58FG1 418 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 PRAMEF18Q5VWM3 479 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 PCDHA1Q9Y5I3 950 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 BMP3P12645 472 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 E2F4Q16254 413 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 FAM83BQ5T0W9 1011 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 GMCL1P1Q8NEA9 526 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 P2RX7Q99572 595 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 RIC8AQ9NPQ8 531 aa14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 CNOT7Q9UIV1 285 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-206ENST00000553888 POLR2AP24928 1970 aaKnown RBP14.46□□□□□ -0.1
VIPAS39-206ENST00000553888 NEMFO60524 1076 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 SLFN14P0C7P3 912 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 SMARCE1Q969G3 411 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 NAT10Q9H0A0 1025 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 PSTPIP2Q9H939 334 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 CAVIN2O95810 425 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 ARL6IP4Q66PJ3 421 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 FAM83AQ86UY5 434 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 SMYD4Q8IYR2 804 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 ATP1A3P13637 1013 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 LMOD1P29536 600 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 TECP42680 631 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 ZNF280AP59817 542 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 PPP4R3BQ5MIZ7 849 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 SYDE2Q5VT97 1194 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 PDXDC2PQ6P474 469 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 GMCL1Q96IK5 515 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 TEPSINQ96N21 525 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 HACL1Q9UJ83 578 aa14.45□□□□□ -0.1
VIPAS39-206ENST00000553888 hCG_1984214I3L0E3 225 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 FZD9O00144 591 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 CAP2P40123 477 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 CLK2P49760 499 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 SH3RF1Q7Z6J0 888 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 DRC7Q8IY82 874 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 ZNF713Q8N859 430 aaPredicted RBP14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 CUL5Q93034 780 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 COBLO75128 1261 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 LONP1P36776 959 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 TXKP42681 527 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 FMR1Q06787 632 aaKnown RBP eCLIP14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 FKBP1CQ5VVH2 108 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 C17orf53Q8N3J3 647 aaPredicted RBP14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 ZKSCAN5Q9Y2L8 839 aa14.44□□□□□ -0.1
VIPAS39-206ENST00000553888 PTGS1P23219 599 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 CUL4BQ13620 913 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 KCNF1Q9H3M0 494 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 ARHGEF10LQ9HCE6 1279 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 FBXO28Q9NVF7 368 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 DPYDQ12882 1025 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 MORC3Q14149 939 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 CCDC144BQ3MJ40 725 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 HS1BP3Q53T59 392 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 NAALADL2Q58DX5 795 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 ARHGAP27Q6ZUM4 889 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 RASSF8Q8NHQ8 419 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 MED15Q96RN5 788 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 TMX2Q9Y320 296 aa14.43□□□□□ -0.1
VIPAS39-206ENST00000553888 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 CCDC174Q6PII3 467 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 FAM177A1Q8N128 213 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 TRPM4Q8TD43 1214 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 BPIFA3Q9BQP9 254 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 HOOK1Q9UJC3 728 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 SBF1O95248 1867 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 CD44P16070 742 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 MSNP26038 577 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms