RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 CGNL1Q0VF96 1302 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 FAM221AA4D161 298 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 IGF2BP3O00425 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 SLITRK5O94991 958 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 GRK4P32298 578 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 CC2D1BQ5T0F9 858 aaKnown RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 CDC37L1Q7L3B6 337 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 UBP1Q9NZI7 540 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
ATXN3-222ENST00000553570 ATRNO75882 1429 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 NSD3Q9BZ95 1437 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 SLIT2O94813 1529 aa6.3□□□□□ -1.4
ATXN3-222ENST00000553570 USP19O94966 1318 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 KIF7Q2M1P5 1343 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 SPATA31A5Q5VU36 1347 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 SPATA31A7Q8IWB4 1347 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 F13A1P00488 732 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 CEACAM5P06731 702 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 GLI3P10071 1580 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-222ENST00000553570 CRKP46108 304 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 RPL6Q02878 288 aaKnown RBP6.29□□□□□ -1.4
ATXN3-222ENST00000553570 ARID5AQ03989 594 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 BNIP3Q12983 259 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-222ENST00000553570 FAM196AQ6ZSG2 479 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 SSH2Q76I76 1423 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 KRT27Q7Z3Y8 459 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 TCP11L2Q8N4U5 519 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 JARID2Q92833 1246 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-222ENST00000553570 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
ATXN3-222ENST00000553570 SPATA31A1Q5TZJ5 1347 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 SBF2Q86WG5 1849 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 EXOC5O00471 708 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 CILPO75339 1184 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 TAL1P17542 331 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-222ENST00000553570 LMNB1P20700 586 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
ATXN3-222ENST00000553570 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 HID1Q8IV36 788 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 IP6K1Q92551 441 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 PPP1R1BQ9UD71 204 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-222ENST00000553570 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
ATXN3-222ENST00000553570 MAP3K19Q56UN5 1328 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 VIRMAQ69YN4 1812 aaKnown RBP6.27□□□□□ -1.41
ATXN3-222ENST00000553570 WNK3Q9BYP7 1800 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 RGS12O14924 1447 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 SLIT3O75094 1523 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 CST3P01034 146 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-222ENST00000553570 CD8BP10966 210 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 IRAK1P51617 712 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.41
ATXN3-222ENST00000553570 PRKCQQ04759 706 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
ATXN3-222ENST00000553570 DDB1Q16531 1140 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
ATXN3-222ENST00000553570 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 FLCNQ8NFG4 579 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 GTF2IRD1Q9UHL9 959 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 CPDO75976 1380 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 CCDC7Q96M83 1385 aa6.27□□□□□ -1.41
ATXN3-222ENST00000553570 USP54Q70EL1 1684 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 LMO7Q8WWI1 1683 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 WASHC2AQ641Q2 1341 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 TLR3O15455 904 aaKnown RBP6.26□□□□□ -1.41
ATXN3-222ENST00000553570 FGRP09769 529 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 HOXC9P31274 260 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 CD96P40200 585 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 APOBRQ0VD83 1088 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 C22orf34Q6ZV56 151 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms