RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC39A5Q6ZMH5 540 aa21.4■■□□□ 1.02
SHMT2-206ENST00000553529 SH3RF1Q7Z6J0 888 aa21.4■■□□□ 1.02
SHMT2-206ENST00000553529 FBXO16Q8IX29 292 aaPredicted RBP21.4■■□□□ 1.02
SHMT2-206ENST00000553529 STAG2Q8N3U4 1231 aa21.4■■□□□ 1.02
SHMT2-206ENST00000553529 FBXO40Q9UH90 709 aa21.4■■□□□ 1.02
SHMT2-206ENST00000553529 RAD50Q92878 1312 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 RBAK-RBAKDNI3L0D1 243 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 PCP11498 1178 aaKnown RBP21.39■■□□□ 1.01
SHMT2-206ENST00000553529 SEC23AQ15436 765 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 SLC35G1Q2M3R5 365 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 USH1GQ495M9 461 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 DGKHQ86XP1 1220 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 TBC1D5Q92609 795 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 LRCH3Q96II8 777 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 TTC14Q96N46 770 aa21.39■■□□□ 1.01
SHMT2-206ENST00000553529 GPHNQ9NQX3 736 aaPredicted RBP21.39■■□□□ 1.01
SHMT2-206ENST00000553529 ZNF467Q7Z7K2 595 aaPredicted RBP21.38■■□□□ 1.01
SHMT2-206ENST00000553529 ARRDC4Q8NCT1 418 aa21.38■■□□□ 1.01
SHMT2-206ENST00000553529 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
SHMT2-206ENST00000553529 NRBP1Q9UHY1 535 aa21.38■■□□□ 1.01
SHMT2-206ENST00000553529 SZT2Q5T011 3432 aa21.38■■□□□ 1.01
SHMT2-206ENST00000553529 A0A1W2PQ45 241 aaPredicted RBP21.37■■□□□ 1.01
SHMT2-206ENST00000553529 A0A1W2PQY0 241 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 CTAGE5O15320 804 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 FDX1P10109 184 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 ANTXR2P58335 489 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 BEX3Q00994 111 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 ANKS1AQ92625 1134 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 VAT1LQ9HCJ6 419 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 CTNNA3Q9UI47 895 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 PHF24Q9UPV7 400 aa21.37■■□□□ 1.01
SHMT2-206ENST00000553529 PTPDC1A2A3K4 754 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 ITGB8P26012 769 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 CALML3P27482 149 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 CDC37Q16543 378 aaPredicted RBP21.36■■□□□ 1.01
SHMT2-206ENST00000553529 TKFCQ3LXA3 575 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 CCSAPQ6IQ19 270 aaPredicted RBP21.36■■□□□ 1.01
SHMT2-206ENST00000553529 IQCA1Q86XH1 822 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 PRDM5Q9NQX1 630 aaPredicted RBP21.36■■□□□ 1.01
SHMT2-206ENST00000553529 FAM184BQ9ULE4 1060 aa21.36■■□□□ 1.01
SHMT2-206ENST00000553529 RBM8AQ9Y5S9 174 aaKnown RBP21.36■■□□□ 1.01
SHMT2-206ENST00000553529 TRIM43BA6NCK2 446 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 E7EWF7 191 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 KCNA10Q16322 511 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 ADGRF4Q8IZF3 695 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 MSL3Q8N5Y2 521 aaKnown RBP21.35■■□□□ 1.01
SHMT2-206ENST00000553529 KLHDC9Q8NEP7 349 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 TRIM43Q96BQ3 446 aaPredicted RBP21.35■■□□□ 1.01
SHMT2-206ENST00000553529 KRT23Q9C075 422 aa21.35■■□□□ 1.01
SHMT2-206ENST00000553529 LSG1Q9H089 658 aaKnown RBP21.35■■□□□ 1.01
SHMT2-206ENST00000553529 C6orf222P0C671 652 aaPredicted RBP21.34■■□□□ 1.01
SHMT2-206ENST00000553529 SMPD1P17405 629 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 SNX17Q15036 470 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 TAPT1Q6NXT6 567 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 UBAC1Q9BSL1 405 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 ABHD16BQ9H3Z7 469 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 COL20A1Q9P218 1284 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 LAMA3Q16787 3333 aa21.34■■□□□ 1.01
SHMT2-206ENST00000553529 PPP1R11O60927 126 aaPredicted RBP21.33■■□□□ 1.01
SHMT2-206ENST00000553529 ALDH5A1P51649 535 aaPredicted RBP21.33■■□□□ 1.01
SHMT2-206ENST00000553529 ACLYP53396 1101 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 TLE2Q04725 743 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 QRICH1Q2TAL8 776 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
SHMT2-206ENST00000553529 PPP1R13LQ8WUF5 828 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 RUFY2Q8WXA3 655 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 MAP4K1Q92918 833 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 JMJD4Q9H9V9 463 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 PDLIM7Q9NR12 457 aa21.33■■□□□ 1.01
SHMT2-206ENST00000553529 PQBP1O60828 265 aaKnown RBP21.32■■□□□ 1
SHMT2-206ENST00000553529 DUSP11O75319 330 aaKnown RBP21.32■■□□□ 1
SHMT2-206ENST00000553529 RPS6P62753 249 aaKnown RBP21.32■■□□□ 1
SHMT2-206ENST00000553529 RNF180Q86T96 592 aa21.32■■□□□ 1
SHMT2-206ENST00000553529 ESYT1Q9BSJ8 1104 aa21.32■■□□□ 1
SHMT2-206ENST00000553529 MYL10Q9BUA6 226 aa21.32■■□□□ 1
SHMT2-206ENST00000553529 UBE2OQ9C0C9 1292 aaKnown RBP21.32■■□□□ 1
SHMT2-206ENST00000553529 CNNM2Q9H8M5 875 aa21.32■■□□□ 1
SHMT2-206ENST00000553529 MAD2L2Q9UI95 211 aa21.32■■□□□ 1
SHMT2-206ENST00000553529 U3KPZ7 1027 aaPredicted RBP21.32■■□□□ 1
SHMT2-206ENST00000553529 MYH6P13533 1939 aa21.31■■□□□ 1
SHMT2-206ENST00000553529 PARP1P09874 1014 aaKnown RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 GPATCH4Q5T3I0 446 aaKnown RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 RNF207Q6ZRF8 634 aa21.31■■□□□ 1
SHMT2-206ENST00000553529 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
SHMT2-206ENST00000553529 MB21D2Q8IYB1 491 aaPredicted RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 UPF3AQ9H1J1 476 aaKnown RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 GNEQ9Y223 722 aaKnown RBP21.31■■□□□ 1
SHMT2-206ENST00000553529 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
SHMT2-206ENST00000553529 DHX16O60231 1041 aaKnown RBP21.3■■□□□ 1
SHMT2-206ENST00000553529 ASGR1P07306 291 aa21.3■■□□□ 1
SHMT2-206ENST00000553529 TNFAIP2Q03169 654 aa21.3■■□□□ 1
SHMT2-206ENST00000553529 CENPQQ7L2Z9 268 aaPredicted RBP21.3■■□□□ 1
SHMT2-206ENST00000553529 COPS5Q92905 334 aa21.3■■□□□ 1
SHMT2-206ENST00000553529 BADQ92934 168 aa21.3■■□□□ 1
SHMT2-206ENST00000553529 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 ASB14A6NK59 587 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 OPLAHO14841 1288 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 BMP8BP34820 402 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 GJA9P57773 515 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms