RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	CALM2	P0DP24	149 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CALM3	P0DP25	149 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	ALAS1	P13196	640 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CCL5	P13501	91 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	RXRA	P19793	462 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CAST	P20810	708 aa	Known RBP	11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CACNB2	Q08289	660 aa	Predicted RBP	11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	TMTC3	Q6ZXV5	915 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	RUFY3	Q7L099	469 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	UBE2Q1	Q7Z7E8	422 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CCAR1	Q8IX12	1150 aa	Known RBP	11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	SRBD1	Q8N5C6	995 aa	Known RBP	11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	FANCB	Q8NB91	859 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	RGS22	Q8NE09	1264 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	MORC4	Q8TE76	937 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	TRERF1	Q96PN7	1200 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	KIF2C	Q99661	725 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	MAF1	Q9H063	256 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	KATNBL1	Q9H079	304 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CRISPLD2	Q9H0B8	497 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	HOMER2	Q9NSB8	354 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	ISY1	Q9ULR0	285 aa	Known RBP	11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	GTF3C3	Q9Y5Q9	886 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CNTNAP5	Q8WYK1	1306 aa		11.78	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	SZT2	Q5T011	3432 aa		11.77	□□□□□ -0.52
CALCOCO1-222	ENST00000553154	CCDC69	A6NI79	296 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	GJB1	P08034	283 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PRKAR2A	P13861	404 aa	Known RBP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PSMA5	P28066	241 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CYP2C19	P33261	490 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CNTN2	Q02246	1040 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	HABP4	Q5JVS0	413 aa	Known RBP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SLC30A10	Q6XR72	485 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154		Q6ZUG5	572 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RAB11FIP4	Q86YS3	637 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MSL3	Q8N5Y2	521 aa	Known RBP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	BRF1	Q92994	677 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PIGS	Q96S52	555 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	UPF3B	Q9BZI7	483 aa	Known RBP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NRBP1	Q9UHY1	535 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SLC12A7	Q9Y666	1083 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PFAS	O15067	1338 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ABCB11	O95342	1321 aa		11.77	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	KLF18	A0A0U1RQI7	1052 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SNAI1	O95863	264 aa	Predicted RBP	11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	EDNRB	P24530	442 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CDC27	P30260	824 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CCND3	P30281	292 aa	Predicted RBP	11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	KIF5B	P33176	963 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	GJA8	P48165	433 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MNX1	P50219	401 aa	Predicted RBP	11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	UBXN2A	P68543	259 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	LHX8	Q68G74	356 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NFXL1	Q6ZNB6	911 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DPP9	Q86TI2	863 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MICU3	Q86XE3	530 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CTCFL	Q8NI51	663 aa	Predicted RBP	11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NUP133	Q8WUM0	1156 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PURB	Q96QR8	312 aa	Known RBP	11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	LZTS2	Q9BRK4	669 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TINF2	Q9BSI4	451 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	COL20A1	Q9P218	1284 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RPTOR	Q8N122	1335 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SYNGAP1	Q96PV0	1343 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CENPF	P49454	3210 aa		11.76	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PNMA6F	A0A0J9YX94	578 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ZBTB43	O43298	467 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RBM25	P49756	843 aa	Known RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	GNAQ	P50148	359 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	HSD17B4	P51659	736 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RPS6	P62753	249 aa	Known RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	APOBR	Q0VD83	1088 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	BAAT	Q14032	418 aa	Predicted RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NTRK3	Q16288	839 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MFSD14C	Q5VZR4	134 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	FBXO11	Q86XK2	927 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ANKRD35	Q8N283	1001 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TBC1D5	Q92609	795 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	AMN	Q9BXJ7	453 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CWC22	Q9HCG8	908 aa	Known RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SMCHD1	A6NHR9	2005 aa		11.75	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	LOC102724159	A0A0B4J2E5	919 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	GOLGA8B	A8MQT2	603 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	EIF5B	O60841	1220 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	EN2	P19622	333 aa	Predicted RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PDIA3	P30101	505 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PWP2	Q15269	919 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RTN1	Q16799	776 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	USH1G	Q495M9	461 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CCDC144CP	Q8IYA2	1237 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CMTR1	Q8N1G2	835 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	U2AF1L4	Q8WU68	220 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DDX11	Q96FC9	970 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RNF208	Q9H0X6	261 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	VAT1L	Q9HCJ6	419 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms