RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 RRAGBQ5VZM2 374 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 TMC6Q7Z403 805 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 SPATA20Q8TB22 786 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 CACTINQ8WUQ7 758 aaKnown RBP10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 HSD3B7Q9H2F3 369 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 HERC5Q9UII4 1024 aaKnown RBP10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 PCDHA1Q9Y5I3 950 aa10.28□□□□□ -0.76
RAB3IP-218ENST00000553099 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.76
RAB3IP-218ENST00000553099 SHTN1A0MZ66 631 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 TMEM232C9JQI7 657 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 TDP2O95551 362 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 TXKP42681 527 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 ECE1P42892 770 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 STX17P56962 302 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 UBASH3AP57075 661 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 CUL4BQ13620 913 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 USH1GQ495M9 461 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 SPDYE2Q495Y8 402 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 FAM151AQ8WW52 585 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 GSDMAQ96QA5 445 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 MTFR1LQ9H019 292 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 RIC8AQ9NPQ8 531 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 SMCHD1A6NHR9 2005 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 PRPHP41219 470 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 MRPL12P52815 198 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 ZYXQ15942 572 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 CALCRLQ16602 461 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 CIAPIN1Q6FI81 312 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 AGBL3Q8NEM8 1001 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 MTRQ99707 1265 aa10.27□□□□□ -0.77
RAB3IP-218ENST00000553099 COL2A1P02458 1487 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 CNTNAP1P78357 1384 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 A0A1W2PRG0 241 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 SLC37A4O43826 429 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 OFD1O75665 1012 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 BMP3P12645 472 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 PTPN21Q16825 1174 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 CABP7Q86V35 215 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 KIAA1524Q8TCG1 905 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 WNT10BO00744 389 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 TAL1P17542 331 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 LRRC8AQ8IWT6 810 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 GMCL1P1Q8NEA9 526 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 DPF2Q92785 391 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 UIMC1Q96RL1 719 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 ARHGEF10LQ9HCE6 1279 aa10.26□□□□□ -0.77
RAB3IP-218ENST00000553099 MARCH6O60337 910 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 COBLO75128 1261 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 PLCG1P19174 1290 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 DHX8Q14562 1220 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 ACER1Q8TDN7 264 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 CCSER1Q9C0I3 900 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 VPS33BQ9H267 617 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 MYOZ2Q9NPC6 264 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 SAMSN1Q9NSI8 373 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 R3HCC1Q9Y3T6 440 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 POTEMA6NI47 508 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 CBFA2T2O43439 604 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 TMEM266Q2M3C6 531 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 SYDE2Q5VT97 1194 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 ENOX1Q8TC92 643 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 GMCL1Q96IK5 515 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 AK8Q96MA6 479 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 ZBTB21Q9ULJ3 1066 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 MAPK8IP1Q9UQF2 711 aa10.25□□□□□ -0.77
RAB3IP-218ENST00000553099 NFKBIEO00221 500 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 RPN1P04843 607 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 ERCC5P28715 1186 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 TPD52L1Q16890 204 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 GJA10Q969M2 543 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms