RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 Q6ZUG5 572 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 FBXL16Q8N461 479 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 FANCBQ8NB91 859 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 APBA2Q99767 749 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 PTPRFP10586 1907 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 COBLO75128 1261 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 SEC24BO95487 1268 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 TFRCP02786 760 aaKnown RBP12.34□□□□□ -0.43
PTCH1-225ENST00000551845 HMGCRP04035 888 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 TRAF1Q13077 416 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-225ENST00000551845 MFSD14CQ5VZR4 134 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 NPLOC4Q8TAT6 608 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
PTCH1-225ENST00000551845 DIS3Q9Y2L1 958 aaKnown RBP12.34□□□□□ -0.43
PTCH1-225ENST00000551845 MYH8P13535 1937 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 ZBTB5O15062 677 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 ZBTB43O43298 467 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 SGPL1O95470 568 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 PGK2P07205 417 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 QRICH1Q2TAL8 776 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCH1-225ENST00000551845 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 TRIB2Q92519 343 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 BRF1Q92994 677 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 AMNQ9BXJ7 453 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 UNC93B1Q9H1C4 597 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-225ENST00000551845 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
PTCH1-225ENST00000551845 BRPF3Q9ULD4 1205 aa12.33□□□□□ -0.44
PTCH1-225ENST00000551845 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-225ENST00000551845 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 INHAP05111 366 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 RXRAP19793 462 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 CCL14Q16627 93 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 USH1GQ495M9 461 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 OLFML2BQ68BL8 750 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 NSMFQ6X4W1 530 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 HOMER1Q86YM7 354 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 PIGSQ96S52 555 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MAF1Q9H063 256 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 MRPL11Q9Y3B7 192 aaKnown RBP12.32□□□□□ -0.44
PTCH1-225ENST00000551845 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
PTCH1-225ENST00000551845 CYTH3O43739 400 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 RCAN1P53805 252 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 RTN1Q16799 776 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 RNF207Q6ZRF8 634 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 Q7L0L9 218 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 RAB11FIP4Q86YS3 637 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
PTCH1-225ENST00000551845 STXBP5LQ9Y2K9 1186 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 PCDHA1Q9Y5I3 950 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 PFASO15067 1338 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 ABCB11O95342 1321 aa12.31□□□□□ -0.44
PTCH1-225ENST00000551845 MGAMO43451 1857 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 GOLGA8AA7E2F4 631 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
PTCH1-225ENST00000551845 CAPN2P17655 700 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 CYP2C19P33261 490 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 METAP2P50579 478 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTCH1-225ENST00000551845 EVCP57679 992 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 CACNB2Q08289 660 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-225ENST00000551845 TRIM32Q13049 653 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms