RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 MCL1Q07820 350 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 SCRN1Q12765 414 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 STRN3Q13033 797 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 CDK5R2Q13319 367 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 FAM50AQ14320 339 aaKnown RBP6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 PRSS53Q2L4Q9 553 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 CDCA2Q69YH5 1023 aaPredicted RBP6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 RCSD1Q6JBY9 416 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 USP53Q70EK8 1073 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 SCARF2Q96GP6 870 aaPredicted RBP6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 TTC1Q99614 292 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 MCMBPQ9BTE3 642 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 SLC52A1Q9NWF4 448 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 USP21Q9UK80 565 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
RAB3IP-213ENST00000550647 K7ESF4 209 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 WNT9AO14904 365 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 KPNA6O60684 536 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 VAMP4O75379 141 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 APPP05067 770 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 THBDP07204 575 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 BMP3P12645 472 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 ECI1P42126 302 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 MTMR1Q13613 665 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 MBTPS1Q14703 1052 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 PAOXQ6QHF9 649 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 IFNL3Q8IZI9 196 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 OR2W6PQ8NHA6 318 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 GATA6Q92908 595 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 CAMKK2Q96RR4 588 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 ASCC2Q9H1I8 757 aaPredicted RBP6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 GTF2IRD1Q9UHL9 959 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 TRAF6Q9Y4K3 522 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 SPEF1Q9Y4P9 236 aa6.97□□□□□ -1.29
RAB3IP-213ENST00000550647 E2F8A0AVK6 867 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 CBX4O00257 560 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 TSPAN6O43657 245 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 LTBRP36941 435 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 NOP2P46087 812 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 NEK2P51955 445 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 TBX4P57082 545 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 KCNAB2Q13303 367 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 CWF19L1Q69YN2 538 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 LHFPL2Q6ZUX7 228 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 PODNQ7Z5L7 613 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 DDX53Q86TM3 631 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 PPIL6Q8IXY8 311 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 RAVER1Q8IY67 606 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 BEND7Q8N7W2 519 aaPredicted RBP6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 USP7Q93009 1102 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 WNK4Q96J92 1243 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 CAPN6Q9Y6Q1 641 aa6.96□□□□□ -1.3
RAB3IP-213ENST00000550647 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 MEFVO15553 781 aaPredicted RBP6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 KATNA1O75449 491 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 LEFTY1O75610 366 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 F2P00734 622 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 GUCY1A3Q02108 690 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 DSG1Q02413 1049 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 DPY19L1Q2PZI1 675 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 EEF1DP3Q658K8 133 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 IQCEQ6IPM2 695 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 ABHD17CQ6PCB6 329 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 OGFOD3Q6PK18 319 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 KCNT2Q6UVM3 1135 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 CLEC10AQ8IUN9 316 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 PI4K2BQ8TCG2 481 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 CCDC136Q96JN2 1154 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 HEXIM2Q96MH2 286 aaKnown RBP6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 FCRL3Q96P31 734 aaPredicted RBP6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 PHF20Q9BVI0 1012 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 CELF4Q9BZC1 486 aaKnown RBP6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 SAMD15Q9P1V8 674 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
RAB3IP-213ENST00000550647 C2orf71A6NGG8 1288 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 STXBP3O00186 592 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 ARNTLO00327 626 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 NEMP1O14524 444 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 KIF3BO15066 747 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 ZNF205O95201 554 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 CD3EP07766 207 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 SCNN1BP51168 640 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 MECP2P51608 486 aaKnown RBP6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 TNK2Q07912 1038 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 PIK3R6Q5UE93 754 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 CCSAPQ6IQ19 270 aaPredicted RBP6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 CRTC3Q6UUV7 619 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 LBX2Q6XYB7 198 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 MFSD4AQ8N468 514 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 MMP19Q99542 508 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms