RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 PSMB7Q99436 277 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 DDX39AO00148 427 aaKnown RBP18.77■□□□□ 0.6
ATXN2-219ENST00000550104 PHACTR2O75167 634 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 LRRC41Q15345 812 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 ABCB5Q2M3G0 1257 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 ANAPC4Q9UJX5 808 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 RPL13P26373 211 aaKnown RBP18.77■□□□□ 0.6
ATXN2-219ENST00000550104 NBPF3Q9H094 633 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 SBK1Q52WX2 424 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
ATXN2-219ENST00000550104 FBXO11Q86XK2 927 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 KIAA1024Q9UPX6 916 aa18.77■□□□□ 0.6
ATXN2-219ENST00000550104 EPN1Q9Y6I3 576 aaPredicted RBP18.77■□□□□ 0.6
ATXN2-219ENST00000550104 JCADQ9P266 1359 aa18.77■□□□□ 0.59
ATXN2-219ENST00000550104 TEX33O43247 280 aa18.77■□□□□ 0.59
ATXN2-219ENST00000550104 MAEAQ7L5Y9 396 aa18.77■□□□□ 0.59
ATXN2-219ENST00000550104 CLRN2A0PK11 232 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 KRT13P13646 458 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 P2RX5Q93086 422 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 NPR1P16066 1061 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 MAGEA1P43355 309 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 CYP4A11Q02928 519 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 WDR78Q5VTH9 848 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 MAP3K14Q99558 947 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
ATXN2-219ENST00000550104 SP4Q02446 784 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
ATXN2-219ENST00000550104 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
ATXN2-219ENST00000550104 TOB1P50616 345 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 CCZ1BP86790 482 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 CCZ1P86791 482 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 FAM26FQ5R3K3 315 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 SH2D4AQ9H788 454 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 TMEM260Q9NX78 707 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 MAGEF1Q9HAY2 307 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 TPH2Q8IWU9 490 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 DHTKD1Q96HY7 919 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 CSRNP1Q96S65 589 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 TSGA10Q9BZW7 698 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 FAM217BQ9NTX9 383 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 CNTNAP5Q8WYK1 1306 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 GCNT3O95395 438 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 EPB41P11171 864 aaKnown RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 EEF1GP26641 437 aaKnown RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 NEDD1Q8NHV4 660 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 TBC1D5Q92609 795 aa18.75■□□□□ 0.59
ATXN2-219ENST00000550104 MRPL44Q9H9J2 332 aaKnown RBP18.75■□□□□ 0.59
ATXN2-219ENST00000550104 MRC1P22897 1456 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 PRCPP42785 496 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 TOGARAM2Q6ZUX3 1019 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 SUPT20HQ8NEM7 779 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 TCP11X2Q5H9J9 407 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 CLEC10AQ8IUN9 316 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 IFIH1Q9BYX4 1025 aaKnown RBP18.74■□□□□ 0.59
ATXN2-219ENST00000550104 SNAP25P60880 206 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 SEC23AQ15436 765 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 TXNRD1Q16881 649 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
ATXN2-219ENST00000550104 NT5C2P49902 561 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 IFI16Q16666 785 aaKnown RBP18.73■□□□□ 0.59
ATXN2-219ENST00000550104 SLC9C1Q4G0N8 1177 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 MYCT1Q8N699 235 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 SLC35F6Q8N357 371 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 BICD1Q96G01 975 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 BAZ2BQ9UIF8 2168 aaKnown RBP18.73■□□□□ 0.59
ATXN2-219ENST00000550104 TUBB4BP68371 445 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 NCBP1Q09161 790 aaKnown RBP18.73■□□□□ 0.59
ATXN2-219ENST00000550104 POTEMA6NI47 508 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 EFCAB8A8MWE9 144 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 AKR1B1P15121 316 aa18.73■□□□□ 0.59
ATXN2-219ENST00000550104 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 RNASE9P60153 205 aaKnown RBP18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PCDHA6Q9UN73 950 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PCDHA8Q9Y5H6 950 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 FLT1P17948 1338 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PHLPP2Q6ZVD8 1323 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 MYL1P05976 194 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 CCNE1P24864 410 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 TUBB2AQ13885 445 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 TUBB2BQ9BVA1 445 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 HPSEQ9Y251 543 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms