RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 A0A1W2PQ45 241 aaPredicted RBP16.15■□□□□ 0.18
CNOT2-220ENST00000549750 A0A1W2PQY0 241 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 MOXD2PA6NHM9 499 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 NKX3-2P78367 333 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 NUCB1Q02818 461 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 ACVR2BQ13705 512 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 BTNL9Q6UXG8 535 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 CHD1LQ86WJ1 897 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 PLEKHM2Q8IWE5 1019 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 A1CFQ9NQ94 594 aaKnown RBP16.15■□□□□ 0.18
CNOT2-220ENST00000549750 RNF146Q9NTX7 359 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
CNOT2-220ENST00000549750 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
CNOT2-220ENST00000549750 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 TOP1P11387 765 aaKnown RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 CCDC85BQ15834 202 aaPredicted RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 KCTD1Q719H9 257 aa16.14■□□□□ 0.17
CNOT2-220ENST00000549750 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
CNOT2-220ENST00000549750 LENG1Q96BZ8 264 aaPredicted RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
CNOT2-220ENST00000549750 TOX2Q96NM4 488 aa16.14■□□□□ 0.17
CNOT2-220ENST00000549750 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
CNOT2-220ENST00000549750 TRIM6-TRIM34B2RNG4 842 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 IGHDP01880 384 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 SDSP20132 328 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 SLC4A3P48751 1232 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 ACLYP53396 1101 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
CNOT2-220ENST00000549750 ANKRD33Q7Z3H0 272 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 TTC14Q96N46 770 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 TMEM47Q9BQJ4 181 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 PBX4Q9BYU1 374 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
CNOT2-220ENST00000549750 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 LCTP09848 1927 aa16.13■□□□□ 0.17
CNOT2-220ENST00000549750 ASB14A6NK59 587 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 DCDC2CA8MYV0 355 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 ADCY6O43306 1168 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 ICAM1P05362 532 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 IGFBP4P22692 258 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 PBX2P40425 430 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 GJA9P57773 515 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 CCDC174Q6PII3 467 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 RASGRP2Q7LDG7 609 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 PCSK9Q8NBP7 692 aaKnown RBP16.12■□□□□ 0.17
CNOT2-220ENST00000549750 NUP133Q8WUM0 1156 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
CNOT2-220ENST00000549750 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
CNOT2-220ENST00000549750 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
CNOT2-220ENST00000549750 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
CNOT2-220ENST00000549750 HCN4Q9Y3Q4 1203 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 ELP1O95163 1332 aa16.12■□□□□ 0.17
CNOT2-220ENST00000549750 LOC102724159A0A0B4J2E5 919 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 TIMP1P01033 207 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 ALAS1P13196 640 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 FAAP100Q0VG06 881 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 ADGRE1Q14246 886 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 PWP2Q15269 919 aaKnown RBP16.11■□□□□ 0.17
CNOT2-220ENST00000549750 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 EXOC6Q8TAG9 804 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 RILPL2Q969X0 211 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
CNOT2-220ENST00000549750 STARD7Q9NQZ5 370 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 CYP39A1Q9NYL5 469 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 ASTN1O14525 1302 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 CHD9Q3L8U1 2897 aa16.11■□□□□ 0.17
CNOT2-220ENST00000549750 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 GRXCR1A8MXD5 290 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 HIP1O00291 1037 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 CTAGE5O15320 804 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 PDHBP11177 359 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 KCNA10Q16322 511 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 CCDC96Q2M329 555 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
CNOT2-220ENST00000549750 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 GLT1D1Q96MS3 346 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 NECAB3Q96P71 396 aaPredicted RBP16.1■□□□□ 0.17
CNOT2-220ENST00000549750 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
CNOT2-220ENST00000549750 CCPG1Q9ULG6 757 aa16.1■□□□□ 0.17
CNOT2-220ENST00000549750 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
CNOT2-220ENST00000549750 BMP1P13497 986 aa16.09■□□□□ 0.17
CNOT2-220ENST00000549750 CDK7P50613 346 aa16.09■□□□□ 0.17
CNOT2-220ENST00000549750 HAND2P61296 217 aa16.09■□□□□ 0.17
CNOT2-220ENST00000549750 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
CNOT2-220ENST00000549750 PPIGQ13427 754 aaKnown RBP eCLIP16.09■□□□□ 0.176e-6■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms