RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MSL3Q8N5Y2 521 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 GAS2L1Q99501 681 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 ESYT1Q9BSJ8 1104 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 XIRP2A4UGR9 3374 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 ELP1O95163 1332 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 CST5P28325 142 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 PPIGQ13427 754 aaKnown RBP eCLIP18.5■□□□□ 0.556e-10■■■■□ 19.6
CHMP1A-206ENST00000549139 MAMDC4Q6UXC1 1216 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 PPM1EQ8WY54 764 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 ESR2Q92731 530 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 THEGQ9P2T0 379 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 REV3LO60673 3130 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 MCM3APO60318 1980 aa18.5■□□□□ 0.55
CHMP1A-206ENST00000549139 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 DUSP11O75319 330 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 CDC45O75419 566 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 CSF2RAP15509 400 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 COPB2P35606 906 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 IRX5P78411 483 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 GMCL1P1Q8NEA9 526 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 ADAMTS19Q8TE59 1207 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 FAM184BQ9ULE4 1060 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 PIEZO1Q92508 2521 aa18.49■□□□□ 0.55
CHMP1A-206ENST00000549139 DNAJC25-GNG10A0A024R161 153 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 ADCY6O43306 1168 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 NMT2O60551 498 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 ZNF365Q70YC5 407 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 TTC14Q96N46 770 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 KRT23Q9C075 422 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 CNNM2Q9H8M5 875 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 STX8Q9UNK0 236 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 NEDD4P46934 1319 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 MROH7Q68CQ1 1323 aa18.48■□□□□ 0.55
CHMP1A-206ENST00000549139 TRANK1O15050 2925 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 RAD21O60216 631 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 NDUFB10O96000 172 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 ASGR1P07306 291 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 CYP21A2P08686 494 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 FAM83BQ5T0W9 1011 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 FAM126BQ8IXS8 530 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 GLT1D1Q96MS3 346 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 LSG1Q9H089 658 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 UPF3AQ9H1J1 476 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 GBF1Q92538 1859 aa18.47■□□□□ 0.55
CHMP1A-206ENST00000549139 PRRC2BQ5JSZ5 2229 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 B4E1Z4 1266 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 ARVCFO00192 962 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 ACRP10323 421 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 PLA2G5P39877 138 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 PSRC1Q6PGN9 363 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 ZNF467Q7Z7K2 595 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 LRRC47Q8N1G4 583 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 TMEM199Q8N511 208 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 FGD4Q96M96 766 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 ZSWIM5Q9P217 1185 aa18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 RBM8AQ9Y5S9 174 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 TCF20Q9UGU0 1960 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-206ENST00000549139 CTAGE5O15320 804 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 KDM4AO75164 1064 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 GJA9P57773 515 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 IQCA1Q86XH1 822 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 DGKHQ86XP1 1220 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 PCSK9Q8NBP7 692 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 TEX13BQ9BXU2 312 aa18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 CXXC1Q9P0U4 656 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 ZHX1Q9UKY1 873 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-206ENST00000549139 A0A0U1RQG5 324 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 CD4P01730 458 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 C6orf222P0C671 652 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 BMP3P12645 472 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 TRDNQ13061 729 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 RAB30Q15771 203 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 CCDC85BQ15834 202 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 RCSD1Q6JBY9 416 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 GMCL1Q96IK5 515 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 NUP88Q99567 741 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 TMEM47Q9BQJ4 181 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 YBX2Q9Y2T7 364 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-206ENST00000549139 ATP2A1O14983 1001 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 NKX3-2P78367 333 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms