RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 TKFCQ3LXA3 575 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 DAGLBQ8NCG7 672 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 MTMR6Q9Y217 621 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 MRPL11Q9Y3B7 192 aaKnown RBP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 RABGAP1Q9Y3P9 1069 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCRN3-212ENST00000548868 BRD1O95696 1058 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 COPB2P35606 906 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 FOSBP53539 338 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
SCRN3-212ENST00000548868 TMEM132BQ14DG7 1078 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 USH1GQ495M9 461 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
SCRN3-212ENST00000548868 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 MAF1Q9H063 256 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 RAVER2Q9HCJ3 691 aaKnown RBP12.93□□□□□ -0.34
SCRN3-212ENST00000548868 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 KCNJ14Q9UNX9 436 aa12.93□□□□□ -0.34
SCRN3-212ENST00000548868 SMCO2A6NFE2 343 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 ALDH1A1P00352 501 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
SCRN3-212ENST00000548868 CYP2C8P10632 490 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 KRT2P35908 639 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 MAP2K2P36507 400 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 STAT3P40763 770 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 ADCY7P51828 1080 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 MRPL12P52815 198 aaKnown RBP12.92□□□□□ -0.34
SCRN3-212ENST00000548868 GRM1Q13255 1194 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 L1TD1Q5T7N2 865 aaKnown RBP12.92□□□□□ -0.34
SCRN3-212ENST00000548868 SAMD3Q8N6K7 520 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 CUL5Q93034 780 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 RIC8AQ9NPQ8 531 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
SCRN3-212ENST00000548868 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 SLC25A27O95847 323 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 ALAS1P13196 640 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 PKP1Q13835 747 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 TAF1CQ15572 869 aaPredicted RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 POTEEQ6S8J3 1075 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 RIOX2Q8IUF8 465 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 BLIDQ8IZY5 108 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 FOXP1Q9H334 677 aaPredicted RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
SCRN3-212ENST00000548868 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
SCRN3-212ENST00000548868 CNMDO75829 334 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 F13A1P00488 732 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCRN3-212ENST00000548868 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
SCRN3-212ENST00000548868 PLS1Q14651 629 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 NPY5RQ15761 445 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
SCRN3-212ENST00000548868 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 TCHHQ07283 1943 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
SCRN3-212ENST00000548868 PIK3CDO00329 1044 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 AOC2O75106 756 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 HSPA6P17066 643 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 VEGFBP49765 207 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 C1QTNF8P60827 252 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 ERVK-9P63128 1117 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 ERVK-24P63145 666 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 CCNA1P78396 465 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 GHRHRQ02643 423 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 BRAPQ7Z569 592 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.35
SCRN3-212ENST00000548868 SHCBP1Q8NEM2 672 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 ACAD9Q9H845 621 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 RNF146Q9NTX7 359 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 ZDHHC9Q9Y397 364 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.35
SCRN3-212ENST00000548868 PLXNB2O15031 1838 aa12.89□□□□□ -0.35
SCRN3-212ENST00000548868 MYH7BA7E2Y1 1941 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms