RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ALAS1P13196 640 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PDIA4P13667 645 aaKnown RBP20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 MORN1Q5T089 497 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 FAM217BQ9NTX9 383 aaPredicted RBP20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CCPG1Q9ULG6 757 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CCDC196A0A1B0GTZ2 297 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 PALM3A6NDB9 673 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-227ENST00000548080 DDAH1O94760 285 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 SYT1P21579 422 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 ADORA2AP29274 412 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 CDC27P30260 824 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 ADD1P35611 737 aaKnown RBP20.1■□□□□ 0.81
HDAC7-227ENST00000548080 PKP1Q13835 747 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 CCL14Q16627 93 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 RTN1Q16799 776 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
HDAC7-227ENST00000548080 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 MROH8Q9H579 483 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 KIF3AQ9Y496 699 aa20.1■□□□□ 0.81
HDAC7-227ENST00000548080 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 ATP2A1O14983 1001 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 CDKL5O76039 1030 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 BRD1O95696 1058 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 PGK2P07205 417 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 PRMT2P55345 433 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 GRB14Q14449 540 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 CDC37Q16543 378 aaPredicted RBP20.09■□□□□ 0.81
HDAC7-227ENST00000548080 MUM1L1Q5H9M0 696 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 CMTR1Q8N1G2 835 aaKnown RBP20.09■□□□□ 0.81
HDAC7-227ENST00000548080 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 USP6NLQ92738 828 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 TNPO1Q92973 898 aaKnown RBP20.09■□□□□ 0.81
HDAC7-227ENST00000548080 DDX11Q96FC9 970 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 MMP19Q99542 508 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 JMJD4Q9H9V9 463 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 RNF146Q9NTX7 359 aa20.09■□□□□ 0.81
HDAC7-227ENST00000548080 STX6O43752 255 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 COBLO75128 1261 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 FDX1P10109 184 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 GRK4P32298 578 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 TRIM32Q13049 653 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 MAP2K5Q13163 448 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 USH1GQ495M9 461 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 CTCFLQ8NI51 663 aaPredicted RBP20.08■□□□□ 0.81
HDAC7-227ENST00000548080 NPLOC4Q8TAT6 608 aa20.08■□□□□ 0.81
HDAC7-227ENST00000548080 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
HDAC7-227ENST00000548080 CAPN15O75808 1086 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 ICAM1P05362 532 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 FCER1AP12319 257 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 RGS2P41220 211 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 OAZ1P54368 228 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 NTRK3Q16288 839 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 HOMER1Q86YM7 354 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 SOCS4Q8WXH5 440 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 TRERF1Q96PN7 1200 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
HDAC7-227ENST00000548080 ZNF236Q9UL36 1845 aa20.07■□□□□ 0.8
HDAC7-227ENST00000548080 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 CYTH3O43739 400 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 IRF5Q13568 498 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 DPP9Q86TI2 863 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 TRIB2Q92519 343 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 MAP3K14Q99558 947 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 APBA2Q99767 749 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 FLRT1Q9NZU1 646 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 PLXNA1Q9UIW2 1896 aa20.06■□□□□ 0.8
HDAC7-227ENST00000548080 FDPSP14324 419 aaKnown RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 IFNAR1P17181 557 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 KCTD2Q14681 263 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 PIGSQ96S52 555 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 ORC3Q9UBD5 711 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 hCG_1642624A0A1W2PR95 340 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 STRNO43815 780 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 PPFIA3O75145 1194 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 COPB2P35606 906 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 MTFR1Q15390 333 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 ANKRD35Q8N283 1001 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 SRBD1Q8N5C6 995 aaKnown RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 SLAIN1Q8ND83 568 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-227ENST00000548080 ACAD9Q9H845 621 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 MTMR6Q9Y217 621 aa20.05■□□□□ 0.8
HDAC7-227ENST00000548080 NFIBO00712 420 aa20.04■□□□□ 0.8
HDAC7-227ENST00000548080 PPP1R11O60927 126 aaPredicted RBP20.04■□□□□ 0.8
HDAC7-227ENST00000548080 INHAP05111 366 aa20.04■□□□□ 0.8
HDAC7-227ENST00000548080 KIF5BP33176 963 aa20.04■□□□□ 0.8
HDAC7-227ENST00000548080 SSRP1Q08945 709 aaKnown RBP20.04■□□□□ 0.8
HDAC7-227ENST00000548080 NSMFQ6X4W1 530 aa20.04■□□□□ 0.8
HDAC7-227ENST00000548080 CHST13Q8NET6 341 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms