RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
LETMD1-210ENST00000547555 EHBP1Q8NDI1 1231 aa19.2■□□□□ 0.66
LETMD1-210ENST00000547555 ZCCHC17Q9NP64 241 aaKnown RBP19.2■□□□□ 0.66
LETMD1-210ENST00000547555 TMOD2Q9NZR1 351 aa19.2■□□□□ 0.66
LETMD1-210ENST00000547555 BAZ2AQ9UIF9 1905 aaKnown RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 PPFIA4O75335 1185 aa19.19■□□□□ 0.66
LETMD1-210ENST00000547555 CLSTN1O94985 981 aa19.19■□□□□ 0.66
LETMD1-210ENST00000547555 SSRP1Q08945 709 aaKnown RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 APOBEC3FQ8IUX4 373 aaKnown RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
LETMD1-210ENST00000547555 PDE11AQ9HCR9 933 aa19.19■□□□□ 0.66
LETMD1-210ENST00000547555 ADD3Q9UEY8 706 aaKnown RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 RSPH14Q9UHP6 348 aa19.19■□□□□ 0.66
LETMD1-210ENST00000547555 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 COL2A1P02458 1487 aaPredicted RBP19.19■□□□□ 0.66
LETMD1-210ENST00000547555 CACNB3P54284 484 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 CORO7P57737 925 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 NFIAQ12857 509 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 CASP8Q14790 479 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 APTXQ7Z2E3 356 aaKnown RBP19.18■□□□□ 0.66
LETMD1-210ENST00000547555 EFCAB13Q8IY85 973 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 ANKRD20A12PQ8NF67 263 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 CRNKL1Q9BZJ0 848 aaKnown RBP19.18■□□□□ 0.66
LETMD1-210ENST00000547555 FAM198AQ9UFP1 575 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 CNTNAP1P78357 1384 aa19.18■□□□□ 0.66
LETMD1-210ENST00000547555 MMP1P03956 469 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 GNAT2P19087 354 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 PDE4BQ07343 736 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 CYP26C1Q6V0L0 522 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 CHST3Q7LGC8 479 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 FAM83AQ86UY5 434 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 IGSF22Q8N9C0 903 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 CCDC148Q8NFR7 591 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 MRPL44Q9H9J2 332 aaKnown RBP19.17■□□□□ 0.66
LETMD1-210ENST00000547555 DDX4Q9NQI0 724 aaKnown RBP19.17■□□□□ 0.66
LETMD1-210ENST00000547555 VPS18Q9P253 973 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 ENTPD3O75355 529 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 ADKP55263 362 aaKnown RBP19.17■□□□□ 0.66
LETMD1-210ENST00000547555 TNFAIP1Q13829 316 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 ICE2Q659A1 982 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 FERMT2Q96AC1 680 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 VEZTQ9HBM0 779 aa19.17■□□□□ 0.66
LETMD1-210ENST00000547555 LAMB1P07942 1786 aa19.16■□□□□ 0.66
LETMD1-210ENST00000547555 FLT1P17948 1338 aa19.16■□□□□ 0.66
LETMD1-210ENST00000547555 ACTN4O43707 911 aaKnown RBP19.16■□□□□ 0.66
LETMD1-210ENST00000547555 CKAP4Q07065 602 aaKnown RBP19.16■□□□□ 0.66
LETMD1-210ENST00000547555 SH3RF1Q7Z6J0 888 aa19.16■□□□□ 0.66
LETMD1-210ENST00000547555 SUGP1Q8IWZ8 645 aaKnown RBP19.16■□□□□ 0.66
LETMD1-210ENST00000547555 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
LETMD1-210ENST00000547555 ABCB6Q9NP58 842 aa19.16■□□□□ 0.66
LETMD1-210ENST00000547555 LIMA1Q9UHB6 759 aaKnown RBP19.16■□□□□ 0.66
LETMD1-210ENST00000547555 SIPA1L1O43166 1804 aa19.16■□□□□ 0.66
LETMD1-210ENST00000547555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.15■□□□□ 0.66
LETMD1-210ENST00000547555 TCP10L2B9ZVM9 353 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 PRKAB2O43741 272 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 DEXIO95424 95 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 TTC31Q49AM3 519 aaPredicted RBP19.15■□□□□ 0.66
LETMD1-210ENST00000547555 IQCEQ6IPM2 695 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 FAM177A1Q8N128 213 aaPredicted RBP19.15■□□□□ 0.66
LETMD1-210ENST00000547555 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 IGDCC4Q8TDY8 1250 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 TGFBRAP1Q8WUH2 860 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 SDR42E1Q8WUS8 393 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 KRT23Q9C075 422 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 HAUS4Q9H6D7 363 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 ATP8A2Q9NTI2 1148 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 GEMIN8Q9NWZ8 242 aaKnown RBP19.15■□□□□ 0.66
LETMD1-210ENST00000547555 PPP2R3BQ9Y5P8 575 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 ATRNL1Q5VV63 1379 aa19.15■□□□□ 0.66
LETMD1-210ENST00000547555 GSG1L2A8MUP6 293 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 CDC27P30260 824 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 TNNI2P48788 182 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 FMR1Q06787 632 aaKnown RBP eCLIP19.14■□□□□ 0.66
LETMD1-210ENST00000547555 CUL4BQ13620 913 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 ZNF569Q5MCW4 686 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 FAM151AQ8WW52 585 aa19.14■□□□□ 0.66
LETMD1-210ENST00000547555 DCP1AQ9NPI6 582 aaPredicted RBP19.14■□□□□ 0.66
LETMD1-210ENST00000547555 ATXN2Q99700 1313 aaKnown RBP19.14■□□□□ 0.65
LETMD1-210ENST00000547555 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
LETMD1-210ENST00000547555 GOLGA8AA7E2F4 631 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 AMPD2Q01433 879 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 ITIH3Q06033 890 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 MCM6Q14566 821 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 RASA3Q14644 834 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 DNAJC21Q5F1R6 531 aaKnown RBP19.14■□□□□ 0.65
LETMD1-210ENST00000547555 RAD9BQ6WBX8 426 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 GBP6Q6ZN66 633 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 SULF1Q8IWU6 871 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 C10orf67Q8IYJ2 551 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 IQCDQ96DY2 449 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 DEFB129Q9H1M3 183 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
LETMD1-210ENST00000547555 MYO6Q9UM54 1294 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
LETMD1-210ENST00000547555 SYNRGQ9UMZ2 1314 aa19.13■□□□□ 0.65
LETMD1-210ENST00000547555 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
LETMD1-210ENST00000547555 POLR2DO15514 142 aaKnown RBP19.13■□□□□ 0.65
LETMD1-210ENST00000547555 SHOX2O60902 331 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms